RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 AEBP2Q6ZN18 517 aaPredicted RBP31.9■■■□□ 2.7
SSB-209ENST00000470621 CHIC1Q5VXU3 224 aa30.2■■■□□ 2.43
SSB-209ENST00000470621 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
SSB-209ENST00000470621 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
SSB-209ENST00000470621 FOXD1Q16676 465 aa25.4■■□□□ 1.66
SSB-209ENST00000470621 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
SSB-209ENST00000470621 MSH5O43196 834 aa23.84■■□□□ 1.41
SSB-209ENST00000470621 PIAS4Q8N2W9 510 aaPredicted RBP23.71■■□□□ 1.39
SSB-209ENST00000470621 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.37
SSB-209ENST00000470621 ADRA2BP18089 450 aa23.56■■□□□ 1.36
SSB-209ENST00000470621 POTEDQ86YR6 584 aa23.45■■□□□ 1.34
SSB-209ENST00000470621 MAPK8IP2Q13387 824 aaPredicted RBP21.66■■□□□ 1.06
SSB-209ENST00000470621 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
SSB-209ENST00000470621 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
SSB-209ENST00000470621 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
SSB-209ENST00000470621 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
SSB-209ENST00000470621 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
SSB-209ENST00000470621 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
SSB-209ENST00000470621 KCNA4P22459 653 aa20.6■□□□□ 0.89
SSB-209ENST00000470621 RNF216Q9NWF9 866 aaPredicted RBP20.57■□□□□ 0.88
SSB-209ENST00000470621 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
SSB-209ENST00000470621 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
SSB-209ENST00000470621 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
SSB-209ENST00000470621 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
SSB-209ENST00000470621 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
SSB-209ENST00000470621 C1QBPQ07021 282 aaKnown RBP20.03■□□□□ 0.8
SSB-209ENST00000470621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.752e-8■□□□□ 10.3
SSB-209ENST00000470621 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
SSB-209ENST00000470621 U3KPZ7 1027 aaPredicted RBP19.34■□□□□ 0.69
SSB-209ENST00000470621 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
SSB-209ENST00000470621 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
SSB-209ENST00000470621 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
SSB-209ENST00000470621 CAPN15O75808 1086 aa19.05■□□□□ 0.64
SSB-209ENST00000470621 ZBTB22O15209 634 aa19.01■□□□□ 0.63
SSB-209ENST00000470621 DSG3P32926 999 aa18.99■□□□□ 0.63
SSB-209ENST00000470621 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
SSB-209ENST00000470621 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
SSB-209ENST00000470621 APLP2Q06481 763 aa18.82■□□□□ 0.6
SSB-209ENST00000470621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
SSB-209ENST00000470621 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
SSB-209ENST00000470621 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
SSB-209ENST00000470621 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
SSB-209ENST00000470621 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
SSB-209ENST00000470621 ABCB7O75027 752 aa18.59■□□□□ 0.57
SSB-209ENST00000470621 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
SSB-209ENST00000470621 POTEHQ6S545 545 aa18.36■□□□□ 0.53
SSB-209ENST00000470621 POLA2Q14181 598 aa18.19■□□□□ 0.5
SSB-209ENST00000470621 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
SSB-209ENST00000470621 RBM42Q9BTD8 480 aaKnown RBP18.15■□□□□ 0.5
SSB-209ENST00000470621 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
SSB-209ENST00000470621 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
SSB-209ENST00000470621 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
SSB-209ENST00000470621 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
SSB-209ENST00000470621 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
SSB-209ENST00000470621 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
SSB-209ENST00000470621 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
SSB-209ENST00000470621 FBLN2P98095 1184 aa17.34■□□□□ 0.37
SSB-209ENST00000470621 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
SSB-209ENST00000470621 PIP4P2Q8N4L2 257 aa17.32■□□□□ 0.36
SSB-209ENST00000470621 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
SSB-209ENST00000470621 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
SSB-209ENST00000470621 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
SSB-209ENST00000470621 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
SSB-209ENST00000470621 SP7Q8TDD2 431 aaPredicted RBP17.16■□□□□ 0.34
SSB-209ENST00000470621 FKBP8Q14318 412 aa17.06■□□□□ 0.32
SSB-209ENST00000470621 SSUH2Q9Y2M2 353 aa17.04■□□□□ 0.32
SSB-209ENST00000470621 HAX1O00165 279 aa17.03■□□□□ 0.32
SSB-209ENST00000470621 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
SSB-209ENST00000470621 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
SSB-209ENST00000470621 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
SSB-209ENST00000470621 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
SSB-209ENST00000470621 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
SSB-209ENST00000470621 EVX2Q03828 476 aa16.8■□□□□ 0.28
SSB-209ENST00000470621 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSB-209ENST00000470621 PROM2Q8N271 834 aa16.69■□□□□ 0.26
SSB-209ENST00000470621 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
SSB-209ENST00000470621 PRR29P0C7W0 189 aa16.67■□□□□ 0.26
SSB-209ENST00000470621 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
SSB-209ENST00000470621 GABBR2O75899 941 aa16.43■□□□□ 0.22
SSB-209ENST00000470621 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
SSB-209ENST00000470621 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
SSB-209ENST00000470621 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
SSB-209ENST00000470621 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
SSB-209ENST00000470621 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
SSB-209ENST00000470621 VASPP50552 380 aaPredicted RBP16.18■□□□□ 0.18
SSB-209ENST00000470621 CLCN6P51797 869 aa16.18■□□□□ 0.18
SSB-209ENST00000470621 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
SSB-209ENST00000470621 LHX8Q68G74 356 aa16.09■□□□□ 0.17
SSB-209ENST00000470621 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
SSB-209ENST00000470621 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
SSB-209ENST00000470621 MIER1Q8N108 512 aa16.02■□□□□ 0.16
SSB-209ENST00000470621 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
SSB-209ENST00000470621 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
SSB-209ENST00000470621 DCBLD2Q96PD2 775 aa15.96■□□□□ 0.15
SSB-209ENST00000470621 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
SSB-209ENST00000470621 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
SSB-209ENST00000470621 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
SSB-209ENST00000470621 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
SSB-209ENST00000470621 PLEKHG5O94827 1062 aa15.85■□□□□ 0.13
SSB-209ENST00000470621 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms