RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
GPATCH4-209ENST00000498641 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
GPATCH4-209ENST00000498641 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
GPATCH4-209ENST00000498641 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
GPATCH4-209ENST00000498641 ABCC9O60706 1549 aa13.44□□□□□ -0.26
GPATCH4-209ENST00000498641 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
GPATCH4-209ENST00000498641 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
GPATCH4-209ENST00000498641 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
GPATCH4-209ENST00000498641 NACADO15069 1562 aa13.14□□□□□ -0.31
GPATCH4-209ENST00000498641 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
GPATCH4-209ENST00000498641 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
GPATCH4-209ENST00000498641 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
GPATCH4-209ENST00000498641 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
GPATCH4-209ENST00000498641 UNC13AQ9UPW8 1703 aa12.66□□□□□ -0.38
GPATCH4-209ENST00000498641 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
GPATCH4-209ENST00000498641 AEBP2Q6ZN18 517 aaPredicted RBP12.58□□□□□ -0.4
GPATCH4-209ENST00000498641 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
GPATCH4-209ENST00000498641 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
GPATCH4-209ENST00000498641 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-209ENST00000498641 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
GPATCH4-209ENST00000498641 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
GPATCH4-209ENST00000498641 WIZO95785 1651 aa12.32□□□□□ -0.44
GPATCH4-209ENST00000498641 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.44
GPATCH4-209ENST00000498641 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
GPATCH4-209ENST00000498641 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
GPATCH4-209ENST00000498641 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
GPATCH4-209ENST00000498641 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.46
GPATCH4-209ENST00000498641 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
GPATCH4-209ENST00000498641 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
GPATCH4-209ENST00000498641 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
GPATCH4-209ENST00000498641 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
GPATCH4-209ENST00000498641 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
GPATCH4-209ENST00000498641 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
GPATCH4-209ENST00000498641 CHIC1Q5VXU3 224 aa12.04□□□□□ -0.48
GPATCH4-209ENST00000498641 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
GPATCH4-209ENST00000498641 CFTRP13569 1480 aa11.85□□□□□ -0.51
GPATCH4-209ENST00000498641 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
GPATCH4-209ENST00000498641 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
GPATCH4-209ENST00000498641 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
GPATCH4-209ENST00000498641 NESP48681 1621 aa11.75□□□□□ -0.53
GPATCH4-209ENST00000498641 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
GPATCH4-209ENST00000498641 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
GPATCH4-209ENST00000498641 FAM9AQ8IZU1 332 aaPredicted RBP11.71□□□□□ -0.53
GPATCH4-209ENST00000498641 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
GPATCH4-209ENST00000498641 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
GPATCH4-209ENST00000498641 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
GPATCH4-209ENST00000498641 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
GPATCH4-209ENST00000498641 CUX1P39880 1505 aa11.64□□□□□ -0.55
GPATCH4-209ENST00000498641 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
GPATCH4-209ENST00000498641 SOGA1O94964 1423 aa11.6□□□□□ -0.55
GPATCH4-209ENST00000498641 BIVM-ERCC5R4GMW8 1640 aa11.6□□□□□ -0.55
GPATCH4-209ENST00000498641 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
GPATCH4-209ENST00000498641 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
GPATCH4-209ENST00000498641 EEA1Q15075 1411 aa11.57□□□□□ -0.56
GPATCH4-209ENST00000498641 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
GPATCH4-209ENST00000498641 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
GPATCH4-209ENST00000498641 ERCC6Q03468 1493 aa11.56□□□□□ -0.56
GPATCH4-209ENST00000498641 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
GPATCH4-209ENST00000498641 FGD5Q6ZNL6 1462 aa11.55□□□□□ -0.56
GPATCH4-209ENST00000498641 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
GPATCH4-209ENST00000498641 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
GPATCH4-209ENST00000498641 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
GPATCH4-209ENST00000498641 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
GPATCH4-209ENST00000498641 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
GPATCH4-209ENST00000498641 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
GPATCH4-209ENST00000498641 CUX2O14529 1486 aa11.48□□□□□ -0.57
GPATCH4-209ENST00000498641 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
GPATCH4-209ENST00000498641 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
GPATCH4-209ENST00000498641 WDR62O43379 1518 aa11.43□□□□□ -0.58
GPATCH4-209ENST00000498641 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
GPATCH4-209ENST00000498641 IGF1RP08069 1367 aa11.41□□□□□ -0.58
GPATCH4-209ENST00000498641 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
GPATCH4-209ENST00000498641 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
GPATCH4-209ENST00000498641 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
GPATCH4-209ENST00000498641 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
GPATCH4-209ENST00000498641 KIF21BO75037 1637 aa11.37□□□□□ -0.59
GPATCH4-209ENST00000498641 CARMIL1Q5VZK9 1371 aa11.36□□□□□ -0.59
GPATCH4-209ENST00000498641 TNIKQ9UKE5 1360 aa11.36□□□□□ -0.59
GPATCH4-209ENST00000498641 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
GPATCH4-209ENST00000498641 RAPGEF2Q9Y4G8 1499 aa11.36□□□□□ -0.59
GPATCH4-209ENST00000498641 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
GPATCH4-209ENST00000498641 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
GPATCH4-209ENST00000498641 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.65e-7■■■■□ 19.7
GPATCH4-209ENST00000498641 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
GPATCH4-209ENST00000498641 ERICH3Q5RHP9 1530 aa11.32□□□□□ -0.6
GPATCH4-209ENST00000498641 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
GPATCH4-209ENST00000498641 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
GPATCH4-209ENST00000498641 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
GPATCH4-209ENST00000498641 CEP162Q5TB80 1403 aa11.29□□□□□ -0.6
GPATCH4-209ENST00000498641 GRIN2BQ13224 1484 aa11.28□□□□□ -0.6
GPATCH4-209ENST00000498641 CUL7Q14999 1698 aa11.26□□□□□ -0.61
GPATCH4-209ENST00000498641 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
GPATCH4-209ENST00000498641 CLIP1P30622 1438 aa11.24□□□□□ -0.61
GPATCH4-209ENST00000498641 EIF4G3O43432 1585 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-209ENST00000498641 PBRM1Q86U86 1689 aa11.21□□□□□ -0.61
GPATCH4-209ENST00000498641 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
GPATCH4-209ENST00000498641 FBLN2P98095 1184 aa11.2□□□□□ -0.62
GPATCH4-209ENST00000498641 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
GPATCH4-209ENST00000498641 ADAMTS12P58397 1594 aa11.18□□□□□ -0.62
GPATCH4-209ENST00000498641 MAGI1Q96QZ7 1491 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 507.7 ms