Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 AL162377.1-201ENST00000618844 1793 ntBASIC20.94■□□□□ 0.94
RNF139Q8WU17 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RNF139Q8WU17 KRT8P17-201ENST00000453110 1448 ntBASIC20.94■□□□□ 0.94
RNF139Q8WU17 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 AC120498.8-201ENST00000614275 531 ntBASIC20.93■□□□□ 0.94
RNF139Q8WU17 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF139Q8WU17 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF139Q8WU17 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 SMG8-203ENST00000578922 2178 ntBASIC20.92■□□□□ 0.94
RNF139Q8WU17 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF139Q8WU17 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF139Q8WU17 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 POM121L13P-201ENST00000422362 380 ntBASIC20.91■□□□□ 0.94
RNF139Q8WU17 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 AC128676.1-201ENST00000454392 318 ntBASIC20.91■□□□□ 0.94
RNF139Q8WU17 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.91■□□□□ 0.94
RNF139Q8WU17 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF139Q8WU17 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 AC073648.6-201ENST00000641589 218 ntBASIC20.9■□□□□ 0.94
RNF139Q8WU17 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF139Q8WU17 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF139Q8WU17 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms