Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 AC004911.1-201ENST00000416316 871 ntBASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PPP4R4Q6NUP7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PPP4R4Q6NUP7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 KRT18P61-201ENST00000585825 1298 ntBASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PPP4R4Q6NUP7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.02■□□□□ 0.64
PPP4R4Q6NUP7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.02■□□□□ 0.63
PPP4R4Q6NUP7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PPP4R4Q6NUP7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PPP4R4Q6NUP7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PPP4R4Q6NUP7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PPP4R4Q6NUP7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PPP4R4Q6NUP7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PPP4R4Q6NUP7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms