Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 CHAF1A-207ENST00000589648 563 ntTSL 513.08□□□□□ -0.322e-6■■□□□ 13.1
LSM11P83369 PELP1-211ENST00000573523 3878 ntTSL 213.08□□□□□ -0.322e-6■■□□□ 13.1
LSM11P83369 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.322e-6■■□□□ 13.1
LSM11P83369 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.362e-6■■□□□ 13.1
LSM11P83369 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.05□□□□□ -0.482e-6■■□□□ 13.1
LSM11P83369 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.512e-6■■□□□ 13.1
LSM11P83369 FANCA-210ENST00000563318 605 ntTSL 511.74□□□□□ -0.531e-7■■□□□ 13.1
LSM11P83369 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.572e-6■■□□□ 13.1
LSM11P83369 SRSF11-216ENST00000489188 784 ntTSL 27.76□□□□□ -1.172e-6■■□□□ 13.1
LSM11P83369 HNRNPH1-246ENST00000523449 793 ntTSL 313.96□□□□□ -0.171e-8■■□□□ 13.1
LSM11P83369 PLCG1-217ENST00000609257 956 ntTSL 511.83□□□□□ -0.527e-9■■□□□ 13.1
LSM11P83369 PLCG1-214ENST00000607954 1005 ntTSL 510.73□□□□□ -0.697e-9■■□□□ 13.1
LSM11P83369 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-6■■□□□ 13.1
LSM11P83369 UBE2G2-206ENST00000481546 4340 ntTSL 1 (best)7.96□□□□□ -1.131e-6■■□□□ 13.1
LSM11P83369 QTRT1-207ENST00000589488 1571 ntTSL 519.84■□□□□ 0.773e-7■■□□□ 13
LSM11P83369 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.393e-7■■□□□ 13
LSM11P83369 QTRT1-202ENST00000421333 1502 ntTSL 216.11■□□□□ 0.173e-7■■□□□ 13
LSM11P83369 QTRT1-206ENST00000587861 2034 ntTSL 215.25■□□□□ 0.033e-7■■□□□ 13
LSM11P83369 EPS8L2-204ENST00000524973 403 ntTSL 214.38□□□□□ -0.115e-11■■□□□ 13
LSM11P83369 OGT-209ENST00000474633 564 ntTSL 28.41□□□□□ -1.064e-8■■□□□ 13
LSM11P83369 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.463e-7■■□□□ 13
LSM11P83369 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.363e-7■■□□□ 13
LSM11P83369 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.74□□□□□ -0.053e-7■■□□□ 13
LSM11P83369 SERPINF2-205ENST00000453723 838 ntTSL 313.32□□□□□ -0.283e-7■■□□□ 13
LSM11P83369 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC10.18□□□□□ -0.783e-7■■□□□ 13
LSM11P83369 NEDD9-214ENST00000513989 587 ntTSL 49.06□□□□□ -0.963e-7■■□□□ 13
LSM11P83369 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.053e-7■■□□□ 13
LSM11P83369 NEDD9-203ENST00000397378 470 ntTSL 38.42□□□□□ -1.063e-7■■□□□ 13
LSM11P83369 NEDD9-211ENST00000508546 581 ntTSL 58.31□□□□□ -1.083e-7■■□□□ 13
LSM11P83369 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.243e-7■■□□□ 13
LSM11P83369 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)6.86□□□□□ -1.313e-7■■□□□ 13
LSM11P83369 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.63□□□□□ -1.353e-7■■□□□ 13
LSM11P83369 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.473e-7■■□□□ 13
LSM11P83369 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.68□□□□□ -1.983e-7■■□□□ 13
LSM11P83369 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC11.32□□□□□ -0.63e-9■■□□□ 13
LSM11P83369 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.596e-7■■□□□ 13
LSM11P83369 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)17.36■□□□□ 0.376e-7■■□□□ 13
LSM11P83369 SLC2A4RG-202ENST00000473157 991 ntTSL 315.43■□□□□ 0.066e-7■■□□□ 13
LSM11P83369 HEXDC-210ENST00000582131 942 ntTSL 521.71■■□□□ 1.071e-6■■□□□ 13
LSM11P83369 ZNF587B-202ENST00000594328 1670 ntTSL 214.53□□□□□ -0.082e-9■■□□□ 13
LSM11P83369 ZNF587B-203ENST00000594901 2118 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.882e-9■■□□□ 13
LSM11P83369 TRMT2A-218ENST00000492988 854 ntTSL 514.6□□□□□ -0.076e-9■■□□□ 13
LSM11P83369 POLE-210ENST00000537064 8011 ntTSL 1 (best)9.49□□□□□ -0.892e-6■■□□□ 13
LSM11P83369 SFI1-201ENST00000357852 1453 ntTSL 1 (best)16.39■□□□□ 0.211e-7■■□□□ 13
LSM11P83369 SFI1-221ENST00000476577 1485 ntTSL 1 (best)15.01□□□□□ -0.011e-7■■□□□ 13
LSM11P83369 SFI1-212ENST00000452250 2625 ntTSL 213.23□□□□□ -0.291e-7■■□□□ 13
LSM11P83369 SFI1-214ENST00000464333 3019 ntTSL 213.1□□□□□ -0.311e-7■■□□□ 13
LSM11P83369 SFI1-219ENST00000474741 708 ntTSL 512.52□□□□□ -0.411e-7■■□□□ 13
LSM11P83369 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.541e-13■■□□□ 13
LSM11P83369 ASPSCR1-213ENST00000582355 1246 ntTSL 520.63■□□□□ 0.892e-8■■□□□ 13
LSM11P83369 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.94□□□□□ -1.36e-7■■□□□ 12.9
LSM11P83369 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.366e-7■■□□□ 12.9
LSM11P83369 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.591e-6■■□□□ 12.9
LSM11P83369 ANKRD28-202ENST00000412318 4408 ntTSL 23.89□□□□□ -1.791e-6■■□□□ 12.9
LSM11P83369 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.351e-8■■□□□ 12.9
LSM11P83369 HNRNPH1-231ENST00000519033 832 ntTSL 315.03■□□□□ -01e-8■■□□□ 12.9
LSM11P83369 HGFAC-203ENST00000509689 1894 ntTSL 518.87■□□□□ 0.611e-9■■□□□ 12.9
LSM11P83369 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.74■□□□□ 0.431e-9■■□□□ 12.9
LSM11P83369 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.311e-9■■□□□ 12.9
LSM11P83369 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.144e-17■■□□□ 12.9
LSM11P83369 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.45■■□□□ 1.023e-7■■□□□ 12.9
LSM11P83369 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.593e-7■■□□□ 12.9
LSM11P83369 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.73■□□□□ 0.433e-7■■□□□ 12.9
LSM11P83369 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.333e-7■■□□□ 12.9
LSM11P83369 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.07□□□□□ -0.163e-7■■□□□ 12.9
LSM11P83369 RBM6-203ENST00000421682 684 ntTSL 2 BASIC8.54□□□□□ -1.047e-8■■□□□ 12.9
LSM11P83369 MTG1-202ENST00000432508 953 ntTSL 215.04■□□□□ -01e-8■■□□□ 12.9
LSM11P83369 PKN3-202ENST00000483521 597 ntTSL 516.51■□□□□ 0.234e-9■■□□□ 12.9
LSM11P83369 PLCG1-218ENST00000609821 570 ntTSL 55.75□□□□□ -1.497e-9■■□□□ 12.9
LSM11P83369 KNTC1-207ENST00000535186 553 ntTSL 46.87□□□□□ -1.312e-10■■□□□ 12.9
LSM11P83369 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.08□□□□□ -1.762e-10■■□□□ 12.9
LSM11P83369 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.862e-10■■□□□ 12.9
LSM11P83369 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.261e-12■■□□□ 12.9
LSM11P83369 FKBP10-206ENST00000489591 2826 ntTSL 215.52■□□□□ 0.081e-12■■□□□ 12.9
LSM11P83369 FKBP10-203ENST00000455106 1965 ntTSL 213.57□□□□□ -0.241e-12■■□□□ 12.9
LSM11P83369 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC11.14□□□□□ -0.638e-9■■□□□ 12.9
LSM11P83369 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC9.1□□□□□ -0.958e-9■■□□□ 12.9
LSM11P83369 AC079062.1-204ENST00000583405 474 ntTSL 28.16□□□□□ -1.18e-9■■□□□ 12.9
LSM11P83369 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.16□□□□□ -1.748e-9■■□□□ 12.9
LSM11P83369 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.045e-53■■□□□ 12.9
LSM11P83369 NCAPD2-202ENST00000382457 2844 ntTSL 510.03□□□□□ -0.85e-53■■□□□ 12.9
LSM11P83369 NCAPD2-207ENST00000539084 4290 ntTSL 29.57□□□□□ -0.885e-53■■□□□ 12.9
LSM11P83369 NCAPD2-208ENST00000539714 533 ntTSL 39.07□□□□□ -0.965e-53■■□□□ 12.9
LSM11P83369 NCAPD2-210ENST00000541399 584 ntTSL 58.26□□□□□ -1.095e-53■■□□□ 12.9
LSM11P83369 SCARNA10-201ENST00000459255 330 ntBASIC4.16□□□□□ -1.745e-53■■□□□ 12.9
LSM11P83369 RNF220-201ENST00000335497 1203 ntTSL 522.63■■□□□ 1.213e-7■■□□□ 12.9
LSM11P83369 CAPRIN1-205ENST00000528856 595 ntTSL 520.74■□□□□ 0.913e-7■■□□□ 12.9
LSM11P83369 RNF220-208ENST00000471494 720 ntTSL 520.18■□□□□ 0.823e-7■■□□□ 12.9
LSM11P83369 RNF220-209ENST00000474064 2734 ntTSL 219.67■□□□□ 0.743e-7■■□□□ 12.9
LSM11P83369 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.623e-7■■□□□ 12.9
LSM11P83369 RNF220-205ENST00000440132 1200 ntTSL 217.08■□□□□ 0.323e-7■■□□□ 12.9
LSM11P83369 RNF220-214ENST00000484745 1951 ntTSL 516.34■□□□□ 0.213e-7■■□□□ 12.9
LSM11P83369 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.195e-8■■□□□ 12.9
LSM11P83369 RNF220-212ENST00000475378 916 ntTSL 315.87■□□□□ 0.133e-7■■□□□ 12.9
LSM11P83369 CAPRIN1-217ENST00000534825 668 ntTSL 315.59■□□□□ 0.093e-7■■□□□ 12.9
LSM11P83369 LRRC8C-203ENST00000479252 2993 ntTSL 1 (best)15.43■□□□□ 0.063e-7■■□□□ 12.9
LSM11P83369 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.063e-7■■□□□ 12.9
LSM11P83369 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.013e-7■■□□□ 12.9
LSM11P83369 CAPRIN1-216ENST00000534042 574 ntTSL 514.75□□□□□ -0.053e-7■■□□□ 12.9
LSM11P83369 CAPRIN1-204ENST00000526494 399 ntTSL 414.4□□□□□ -0.13e-7■■□□□ 12.9
Retrieved 100 of 11,495 protein–RNA pairs in 77.9 ms