RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
UBR4-203ENST00000375225 CCDC180Q9P1Z9 1646 aa23.43■■□□□ 1.34
UBR4-203ENST00000375225 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
UBR4-203ENST00000375225 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
UBR4-203ENST00000375225 ABCC9O60706 1549 aa22.1■■□□□ 1.13
UBR4-203ENST00000375225 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
UBR4-203ENST00000375225 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
UBR4-203ENST00000375225 NACADO15069 1562 aa21.79■■□□□ 1.08
UBR4-203ENST00000375225 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.06
UBR4-203ENST00000375225 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
UBR4-203ENST00000375225 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
UBR4-203ENST00000375225 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
UBR4-203ENST00000375225 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
UBR4-203ENST00000375225 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
UBR4-203ENST00000375225 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.912e-8■■□□□ 12.8
UBR4-203ENST00000375225 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
UBR4-203ENST00000375225 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
UBR4-203ENST00000375225 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
UBR4-203ENST00000375225 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
UBR4-203ENST00000375225 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
UBR4-203ENST00000375225 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
UBR4-203ENST00000375225 WIZO95785 1651 aa20.44■□□□□ 0.86
UBR4-203ENST00000375225 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
UBR4-203ENST00000375225 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
UBR4-203ENST00000375225 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
UBR4-203ENST00000375225 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
UBR4-203ENST00000375225 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
UBR4-203ENST00000375225 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
UBR4-203ENST00000375225 HMGXB3Q12766 1538 aa20.08■□□□□ 0.81
UBR4-203ENST00000375225 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
UBR4-203ENST00000375225 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
UBR4-203ENST00000375225 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
UBR4-203ENST00000375225 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
UBR4-203ENST00000375225 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
UBR4-203ENST00000375225 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
UBR4-203ENST00000375225 CFTRP13569 1480 aa19.59■□□□□ 0.73
UBR4-203ENST00000375225 HRCP23327 699 aa19.55■□□□□ 0.72
UBR4-203ENST00000375225 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
UBR4-203ENST00000375225 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
UBR4-203ENST00000375225 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
UBR4-203ENST00000375225 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
UBR4-203ENST00000375225 TRIM26Q12899 539 aaPredicted RBP19.46■□□□□ 0.71
UBR4-203ENST00000375225 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
UBR4-203ENST00000375225 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
UBR4-203ENST00000375225 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
UBR4-203ENST00000375225 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
UBR4-203ENST00000375225 NESP48681 1621 aa19.35■□□□□ 0.69
UBR4-203ENST00000375225 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
UBR4-203ENST00000375225 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
UBR4-203ENST00000375225 FANCD2Q9BXW9 1451 aa19.33■□□□□ 0.69
UBR4-203ENST00000375225 EEA1Q15075 1411 aa19.29■□□□□ 0.68
UBR4-203ENST00000375225 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
UBR4-203ENST00000375225 CUX1P39880 1505 aa19.26■□□□□ 0.67
UBR4-203ENST00000375225 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
UBR4-203ENST00000375225 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
UBR4-203ENST00000375225 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
UBR4-203ENST00000375225 ZEB1P37275 1124 aaPredicted RBP19.16■□□□□ 0.66
UBR4-203ENST00000375225 SOGA1O94964 1423 aa19.11■□□□□ 0.65
UBR4-203ENST00000375225 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
UBR4-203ENST00000375225 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
UBR4-203ENST00000375225 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
UBR4-203ENST00000375225 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
UBR4-203ENST00000375225 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
UBR4-203ENST00000375225 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
UBR4-203ENST00000375225 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
UBR4-203ENST00000375225 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
UBR4-203ENST00000375225 RUSC2Q8N2Y8 1516 aa19.02■□□□□ 0.64
UBR4-203ENST00000375225 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
UBR4-203ENST00000375225 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
UBR4-203ENST00000375225 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
UBR4-203ENST00000375225 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
UBR4-203ENST00000375225 WDR62O43379 1518 aa18.94■□□□□ 0.62
UBR4-203ENST00000375225 CUX2O14529 1486 aa18.93■□□□□ 0.62
UBR4-203ENST00000375225 KIF21BO75037 1637 aa18.93■□□□□ 0.62
UBR4-203ENST00000375225 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
UBR4-203ENST00000375225 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
UBR4-203ENST00000375225 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
UBR4-203ENST00000375225 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
UBR4-203ENST00000375225 UBTFP17480 764 aaKnown RBP18.87■□□□□ 0.61
UBR4-203ENST00000375225 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
UBR4-203ENST00000375225 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
UBR4-203ENST00000375225 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
UBR4-203ENST00000375225 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
UBR4-203ENST00000375225 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
UBR4-203ENST00000375225 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
UBR4-203ENST00000375225 CUL7Q14999 1698 aa18.77■□□□□ 0.59
UBR4-203ENST00000375225 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
UBR4-203ENST00000375225 IGF1RP08069 1367 aa18.75■□□□□ 0.59
UBR4-203ENST00000375225 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
UBR4-203ENST00000375225 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
UBR4-203ENST00000375225 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
UBR4-203ENST00000375225 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
UBR4-203ENST00000375225 CLIP1P30622 1438 aa18.68■□□□□ 0.58
UBR4-203ENST00000375225 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
UBR4-203ENST00000375225 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
UBR4-203ENST00000375225 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.575e-7■■■■■ 29.9
UBR4-203ENST00000375225 ZNF608Q9ULD9 1512 aaPredicted RBP18.61■□□□□ 0.57
UBR4-203ENST00000375225 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
UBR4-203ENST00000375225 APLP2Q06481 763 aa18.6■□□□□ 0.57
UBR4-203ENST00000375225 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms