RNA–Protein interactions for RNA: ENST00000459255.1

SCARNA10-201, small Cajal body-specific RNA 10, humanhuman

BASIC

Gene SCARNA10, Length 330 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA10-201ENST00000459255 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
SCARNA10-201ENST00000459255 ABCC9O60706 1549 aa9.74□□□□□ -0.85
SCARNA10-201ENST00000459255 CCDC180Q9P1Z9 1646 aa9.62□□□□□ -0.87
SCARNA10-201ENST00000459255 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
SCARNA10-201ENST00000459255 RB1CC1Q8TDY2 1594 aa9.16□□□□□ -0.94
SCARNA10-201ENST00000459255 ZCCHC6Q5VYS8 1495 aaKnown RBP9.12□□□□□ -0.95
SCARNA10-201ENST00000459255 NACADO15069 1562 aa9.08□□□□□ -0.96
SCARNA10-201ENST00000459255 DCAF1Q9Y4B6 1507 aa9.07□□□□□ -0.96
SCARNA10-201ENST00000459255 BICRAQ9NZM4 1560 aa9.05□□□□□ -0.96
SCARNA10-201ENST00000459255 PABPN1Q86U42 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCARNA10-201ENST00000459255 MYO15BQ96JP2 1530 aa9.05□□□□□ -0.96
SCARNA10-201ENST00000459255 UNC13AQ9UPW8 1703 aa9.04□□□□□ -0.96
SCARNA10-201ENST00000459255 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
SCARNA10-201ENST00000459255 CC2D2AQ9P2K1 1620 aa8.8□□□□□ -1
SCARNA10-201ENST00000459255 SHROOM4Q9ULL8 1493 aa8.79□□□□□ -1
SCARNA10-201ENST00000459255 CECR2Q9BXF3 1484 aa8.78□□□□□ -1
SCARNA10-201ENST00000459255 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
SCARNA10-201ENST00000459255 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
SCARNA10-201ENST00000459255 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.02
SCARNA10-201ENST00000459255 CUX2O14529 1486 aa8.45□□□□□ -1.06
SCARNA10-201ENST00000459255 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
SCARNA10-201ENST00000459255 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
SCARNA10-201ENST00000459255 SMARCA4P51532 1647 aa8.42□□□□□ -1.06
SCARNA10-201ENST00000459255 MROH2BQ7Z745 1585 aa8.41□□□□□ -1.06
SCARNA10-201ENST00000459255 ATAD2BQ9ULI0 1458 aa8.39□□□□□ -1.07
SCARNA10-201ENST00000459255 RSF1Q96T23 1441 aaPredicted RBP8.39□□□□□ -1.07
SCARNA10-201ENST00000459255 NESP48681 1621 aa8.38□□□□□ -1.07
SCARNA10-201ENST00000459255 PEG3Q9GZU2 1588 aa8.37□□□□□ -1.07
SCARNA10-201ENST00000459255 HMGXB3Q12766 1538 aa8.34□□□□□ -1.08
SCARNA10-201ENST00000459255 ERCC6Q03468 1493 aa8.33□□□□□ -1.08
SCARNA10-201ENST00000459255 SMARCA2P51531 1590 aa8.33□□□□□ -1.08
SCARNA10-201ENST00000459255 THOC2Q8NI27 1593 aaKnown RBP8.32□□□□□ -1.08
SCARNA10-201ENST00000459255 WIZO95785 1651 aa8.32□□□□□ -1.08
SCARNA10-201ENST00000459255 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
SCARNA10-201ENST00000459255 BAZ1BQ9UIG0 1483 aaKnown RBP8.26□□□□□ -1.09
SCARNA10-201ENST00000459255 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
SCARNA10-201ENST00000459255 KIF21AQ7Z4S6 1674 aa8.22□□□□□ -1.09
SCARNA10-201ENST00000459255 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
SCARNA10-201ENST00000459255 CCDC88BA6NC98 1476 aa8.16□□□□□ -1.1
SCARNA10-201ENST00000459255 WDR62O43379 1518 aa8.15□□□□□ -1.1
SCARNA10-201ENST00000459255 PDS5BQ9NTI5 1447 aa8.14□□□□□ -1.11
SCARNA10-201ENST00000459255 CADPSQ9ULU8 1353 aa8.14□□□□□ -1.11
SCARNA10-201ENST00000459255 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
SCARNA10-201ENST00000459255 MRC2Q9UBG0 1479 aa8.13□□□□□ -1.11
SCARNA10-201ENST00000459255 CFTRP13569 1480 aa8.08□□□□□ -1.12
SCARNA10-201ENST00000459255 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
SCARNA10-201ENST00000459255 FANCD2Q9BXW9 1451 aa8.04□□□□□ -1.12
SCARNA10-201ENST00000459255 CEP164Q9UPV0 1460 aa8.03□□□□□ -1.12
SCARNA10-201ENST00000459255 PRDM2Q13029 1718 aa8.01□□□□□ -1.13
SCARNA10-201ENST00000459255 OSCARQ8IYS5 282 aa7.99□□□□□ -1.13
SCARNA10-201ENST00000459255 ZNF608Q9ULD9 1512 aaPredicted RBP7.98□□□□□ -1.13
SCARNA10-201ENST00000459255 RIMBP3CA6NJZ7 1639 aa7.97□□□□□ -1.13
SCARNA10-201ENST00000459255 RIMBP3BA6NNM3 1639 aa7.97□□□□□ -1.13
SCARNA10-201ENST00000459255 RIMBP3Q9UFD9 1639 aa7.97□□□□□ -1.13
SCARNA10-201ENST00000459255 PELP1Q8IZL8 1130 aaKnown RBP7.93□□□□□ -1.14
SCARNA10-201ENST00000459255 ARHGEF11O15085 1522 aa7.93□□□□□ -1.14
SCARNA10-201ENST00000459255 ABCC8Q09428 1581 aa7.9□□□□□ -1.14
SCARNA10-201ENST00000459255 TOPBP1Q92547 1522 aa7.89□□□□□ -1.15
SCARNA10-201ENST00000459255 IFT140Q96RY7 1462 aa7.89□□□□□ -1.15
SCARNA10-201ENST00000459255 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
SCARNA10-201ENST00000459255 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
SCARNA10-201ENST00000459255 CHIC1Q5VXU3 224 aa7.87□□□□□ -1.15
SCARNA10-201ENST00000459255 TARBP1Q13395 1621 aaKnown RBP7.87□□□□□ -1.15
SCARNA10-201ENST00000459255 EIF4G3O43432 1585 aaKnown RBP7.87□□□□□ -1.15
SCARNA10-201ENST00000459255 DNMBPQ6XZF7 1577 aa7.87□□□□□ -1.15
SCARNA10-201ENST00000459255 CUX1P39880 1505 aa7.87□□□□□ -1.15
SCARNA10-201ENST00000459255 MYT1Q01538 1121 aa7.86□□□□□ -1.15
SCARNA10-201ENST00000459255 TOP2BQ02880 1626 aa7.85□□□□□ -1.15
SCARNA10-201ENST00000459255 BIVM-ERCC5R4GMW8 1640 aa7.85□□□□□ -1.15
SCARNA10-201ENST00000459255 SYNJ1O43426 1573 aa7.85□□□□□ -1.15
SCARNA10-201ENST00000459255 AQRO60306 1485 aaKnown RBP eCLIP7.85□□□□□ -1.15
SCARNA10-201ENST00000459255 CHD1O14646 1710 aa7.83□□□□□ -1.16
SCARNA10-201ENST00000459255 CYB5RLQ6IPT4 315 aa7.83□□□□□ -1.16
SCARNA10-201ENST00000459255 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
SCARNA10-201ENST00000459255 FGD5Q6ZNL6 1462 aa7.81□□□□□ -1.16
SCARNA10-201ENST00000459255 SOGA1O94964 1423 aa7.8□□□□□ -1.16
SCARNA10-201ENST00000459255 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
SCARNA10-201ENST00000459255 RAD54L2Q9Y4B4 1467 aa7.8□□□□□ -1.16
SCARNA10-201ENST00000459255 ABCA10Q8WWZ4 1543 aa7.77□□□□□ -1.17
SCARNA10-201ENST00000459255 TDRD9Q8NDG6 1382 aaKnown RBP7.76□□□□□ -1.17
SCARNA10-201ENST00000459255 WDR97A6NE52 1622 aa7.74□□□□□ -1.17
SCARNA10-201ENST00000459255 SNAPC4Q5SXM2 1469 aa7.74□□□□□ -1.17
SCARNA10-201ENST00000459255 KIF27Q86VH2 1401 aa7.71□□□□□ -1.17
SCARNA10-201ENST00000459255 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.18
SCARNA10-201ENST00000459255 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
SCARNA10-201ENST00000459255 GAPVD1Q14C86 1478 aa7.7□□□□□ -1.18
SCARNA10-201ENST00000459255 RUSC2Q8N2Y8 1516 aa7.7□□□□□ -1.18
SCARNA10-201ENST00000459255 FBLN2P98095 1184 aa7.7□□□□□ -1.18
SCARNA10-201ENST00000459255 ERCC6L2Q5T890 1561 aa7.7□□□□□ -1.18
SCARNA10-201ENST00000459255 EEA1Q15075 1411 aa7.69□□□□□ -1.18
SCARNA10-201ENST00000459255 MAGI1Q96QZ7 1491 aaPredicted RBP7.69□□□□□ -1.18
SCARNA10-201ENST00000459255 IGF1RP08069 1367 aa7.69□□□□□ -1.18
SCARNA10-201ENST00000459255 SYNJ2O15056 1496 aa7.68□□□□□ -1.18
SCARNA10-201ENST00000459255 GRIN2BQ13224 1484 aa7.68□□□□□ -1.18
SCARNA10-201ENST00000459255 ERICH3Q5RHP9 1530 aa7.68□□□□□ -1.18
SCARNA10-201ENST00000459255 CSRNP3Q8WYN3 585 aa7.67□□□□□ -1.18
SCARNA10-201ENST00000459255 TTBK1Q5TCY1 1321 aaPredicted RBP7.67□□□□□ -1.18
SCARNA10-201ENST00000459255 PBRM1Q86U86 1689 aa7.65□□□□□ -1.18
SCARNA10-201ENST00000459255 CHMP7Q8WUX9 453 aaPredicted RBP7.64□□□□□ -1.19
SCARNA10-201ENST00000459255 CARMIL1Q5VZK9 1371 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms