RNA–Protein interactions for RNA: ENST00000535186.1

KNTC1-207, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 553 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-207ENST00000535186 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
KNTC1-207ENST00000535186 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
KNTC1-207ENST00000535186 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
KNTC1-207ENST00000535186 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
KNTC1-207ENST00000535186 FOXD1Q16676 465 aa13.07□□□□□ -0.32
KNTC1-207ENST00000535186 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
KNTC1-207ENST00000535186 MSH5O43196 834 aa12.45□□□□□ -0.42
KNTC1-207ENST00000535186 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
KNTC1-207ENST00000535186 PPP6R1Q9UPN7 881 aa11.82□□□□□ -0.52
KNTC1-207ENST00000535186 ADRA2BP18089 450 aa11.81□□□□□ -0.52
KNTC1-207ENST00000535186 PLPPR3Q6T4P5 718 aa11.74□□□□□ -0.53
KNTC1-207ENST00000535186 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
KNTC1-207ENST00000535186 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
KNTC1-207ENST00000535186 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
KNTC1-207ENST00000535186 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
KNTC1-207ENST00000535186 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
KNTC1-207ENST00000535186 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
KNTC1-207ENST00000535186 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
KNTC1-207ENST00000535186 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
KNTC1-207ENST00000535186 PPP4R3CPQ6ZMV5 832 aa10.23□□□□□ -0.77
KNTC1-207ENST00000535186 RNF216Q9NWF9 866 aaPredicted RBP10.15□□□□□ -0.78
KNTC1-207ENST00000535186 CNKSR2Q8WXI2 1034 aa10.14□□□□□ -0.79
KNTC1-207ENST00000535186 POTEHQ6S545 545 aa10.13□□□□□ -0.79
KNTC1-207ENST00000535186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
KNTC1-207ENST00000535186 DNAJC5BQ9UF47 199 aa9.98□□□□□ -0.81
KNTC1-207ENST00000535186 CAPN15O75808 1086 aa9.79□□□□□ -0.84
KNTC1-207ENST00000535186 DSG3P32926 999 aa9.72□□□□□ -0.85
KNTC1-207ENST00000535186 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
KNTC1-207ENST00000535186 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
KNTC1-207ENST00000535186 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.86
KNTC1-207ENST00000535186 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
KNTC1-207ENST00000535186 ABCB7O75027 752 aa9.52□□□□□ -0.89
KNTC1-207ENST00000535186 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
KNTC1-207ENST00000535186 ZNF219Q9P2Y4 722 aaPredicted RBP9.39□□□□□ -0.91
KNTC1-207ENST00000535186 APLP2Q06481 763 aa9.38□□□□□ -0.91
KNTC1-207ENST00000535186 CHRDL2Q6WN34 429 aa9.33□□□□□ -0.92
KNTC1-207ENST00000535186 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
KNTC1-207ENST00000535186 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
KNTC1-207ENST00000535186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
KNTC1-207ENST00000535186 HNRNPUL2Q1KMD3 747 aaKnown RBP9.21□□□□□ -0.94
KNTC1-207ENST00000535186 SLC4A2P04920 1241 aa9.2□□□□□ -0.94
KNTC1-207ENST00000535186 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
KNTC1-207ENST00000535186 POLA2Q14181 598 aa9.07□□□□□ -0.96
KNTC1-207ENST00000535186 HAX1O00165 279 aa9.05□□□□□ -0.96
KNTC1-207ENST00000535186 PIP4P2Q8N4L2 257 aa8.98□□□□□ -0.97
KNTC1-207ENST00000535186 AKT1S1Q96B36 256 aa8.97□□□□□ -0.97
KNTC1-207ENST00000535186 KCNA4P22459 653 aa8.92□□□□□ -0.98
KNTC1-207ENST00000535186 REM2Q8IYK8 340 aaPredicted RBP8.91□□□□□ -0.98
KNTC1-207ENST00000535186 MYCNP04198 464 aaPredicted RBP8.85□□□□□ -0.99
KNTC1-207ENST00000535186 PITPNM1O00562 1244 aa8.84□□□□□ -0.99
KNTC1-207ENST00000535186 OSCARQ8IYS5 282 aa8.82□□□□□ -1
KNTC1-207ENST00000535186 ZBTB12Q9Y330 459 aaPredicted RBP8.82□□□□□ -1
KNTC1-207ENST00000535186 FXR2P51116 673 aaKnown RBP eCLIP8.79□□□□□ -12e-6■□□□□ 10.3
KNTC1-207ENST00000535186 EVX2Q03828 476 aa8.79□□□□□ -1
KNTC1-207ENST00000535186 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.02
KNTC1-207ENST00000535186 LHX8Q68G74 356 aa8.69□□□□□ -1.02
KNTC1-207ENST00000535186 ATF5Q9Y2D1 282 aaPredicted RBP8.67□□□□□ -1.02
KNTC1-207ENST00000535186 PRKAR2AP13861 404 aaKnown RBP8.64□□□□□ -1.03
KNTC1-207ENST00000535186 CLEC11AQ9Y240 323 aa8.62□□□□□ -1.03
KNTC1-207ENST00000535186 GABBR2O75899 941 aa8.58□□□□□ -1.04
KNTC1-207ENST00000535186 C19orf67A6NJJ6 358 aa8.54□□□□□ -1.04
KNTC1-207ENST00000535186 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
KNTC1-207ENST00000535186 SPDYE2BA6NHP3 402 aa8.49□□□□□ -1.05
KNTC1-207ENST00000535186 SPDYE6P0CI01 402 aa8.49□□□□□ -1.05
KNTC1-207ENST00000535186 SPDYE2Q495Y8 402 aa8.49□□□□□ -1.05
KNTC1-207ENST00000535186 FOXD4L1Q9NU39 408 aa8.48□□□□□ -1.05
KNTC1-207ENST00000535186 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
KNTC1-207ENST00000535186 FBLN2P98095 1184 aa8.44□□□□□ -1.06
KNTC1-207ENST00000535186 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
KNTC1-207ENST00000535186 SLC4A1APQ9BWU0 796 aaKnown RBP8.36□□□□□ -1.07
KNTC1-207ENST00000535186 POTEIP0CG38 1075 aa8.35□□□□□ -1.07
KNTC1-207ENST00000535186 PRR29P0C7W0 189 aa8.34□□□□□ -1.07
KNTC1-207ENST00000535186 CD44P16070 742 aaKnown RBP8.34□□□□□ -1.07
KNTC1-207ENST00000535186 DCBLD2Q96PD2 775 aa8.34□□□□□ -1.07
KNTC1-207ENST00000535186 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
KNTC1-207ENST00000535186 POTEMA6NI47 508 aa8.24□□□□□ -1.09
KNTC1-207ENST00000535186 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
KNTC1-207ENST00000535186 FARP1Q9Y4F1 1045 aaPredicted RBP8.22□□□□□ -1.09
KNTC1-207ENST00000535186 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.1
KNTC1-207ENST00000535186 ATXN8OSP0DMR3 200 aa8.2□□□□□ -1.1
KNTC1-207ENST00000535186 CLCN6P51797 869 aa8.2□□□□□ -1.1
KNTC1-207ENST00000535186 POTEGQ6S5H5 508 aa8.19□□□□□ -1.1
KNTC1-207ENST00000535186 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
KNTC1-207ENST00000535186 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
KNTC1-207ENST00000535186 ZBTB22O15209 634 aa8.14□□□□□ -1.11
KNTC1-207ENST00000535186 ZNF579Q8NAF0 562 aaKnown RBP8.11□□□□□ -1.11
KNTC1-207ENST00000535186 GALR2O43603 387 aaPredicted RBP8.1□□□□□ -1.11
KNTC1-207ENST00000535186 POTEB2H3BUK9 544 aa8.08□□□□□ -1.12
KNTC1-207ENST00000535186 PCDH10Q9P2E7 1040 aa8.03□□□□□ -1.12
KNTC1-207ENST00000535186 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
KNTC1-207ENST00000535186 PHF12Q96QT6 1004 aa8□□□□□ -1.13
KNTC1-207ENST00000535186 FAM163AQ96GL9 167 aaPredicted RBP7.99□□□□□ -1.13
KNTC1-207ENST00000535186 METRNQ9UJH8 293 aa7.96□□□□□ -1.14
KNTC1-207ENST00000535186 PELP1Q8IZL8 1130 aaKnown RBP7.95□□□□□ -1.14
KNTC1-207ENST00000535186 CREBZFQ9NS37 354 aa7.93□□□□□ -1.14
KNTC1-207ENST00000535186 MAMSTRQ6ZN01 415 aa7.91□□□□□ -1.14
KNTC1-207ENST00000535186 SLC39A7Q92504 469 aa7.89□□□□□ -1.15
KNTC1-207ENST00000535186 SCUBE2Q9NQ36 999 aa7.89□□□□□ -1.15
KNTC1-207ENST00000535186 POTEJP0CG39 1038 aa7.86□□□□□ -1.15
KNTC1-207ENST00000535186 C7P10643 843 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms