Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 AC026471.1-201ENST00000564629 3026 ntBASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MEIS3P1A6NDR6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
MEIS3P1A6NDR6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 AC135279.3-201ENST00000610945 1311 ntBASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 Z82202.1-201ENST00000623446 1880 ntBASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 AC090340.1-201ENST00000620778 4980 ntBASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 AC007613.1-201ENST00000572811 2597 ntBASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MEIS3P1A6NDR6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MEIS3P1A6NDR6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEIS3P1A6NDR6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms