Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC091305.1-201ENST00000479476 895 ntBASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MIR939-201ENST00000401314 82 ntBASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PTBP1P-201ENST00000554374 1601 ntBASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-1A0A0K0K1D8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CROCCP3-202ENST00000420820 1947 ntBASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms