Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PCDHGB1Q9Y5G3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGB1Q9Y5G3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHGB1Q9Y5G3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGB1Q9Y5G3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGB1Q9Y5G3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHGB1Q9Y5G3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDHGB1Q9Y5G3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGB1Q9Y5G3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PCDHGB1Q9Y5G3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PCDHGB1Q9Y5G3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGB1Q9Y5G3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGB1Q9Y5G3 AL031258.1-201ENST00000623562 325 ntBASIC23.63■■□□□ 1.37
PCDHGB1Q9Y5G3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGB1Q9Y5G3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGB1Q9Y5G3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGB1Q9Y5G3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGB1Q9Y5G3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGB1Q9Y5G3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGB1Q9Y5G3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHGB1Q9Y5G3 BX255925.1-201ENST00000566954 1854 ntBASIC23.6■■□□□ 1.37
PCDHGB1Q9Y5G3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB1Q9Y5G3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHGB1Q9Y5G3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB1Q9Y5G3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGB1Q9Y5G3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGB1Q9Y5G3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGB1Q9Y5G3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PCDHGB1Q9Y5G3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGB1Q9Y5G3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PCDHGB1Q9Y5G3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB1Q9Y5G3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGB1Q9Y5G3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGB1Q9Y5G3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGB1Q9Y5G3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGB1Q9Y5G3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGB1Q9Y5G3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGB1Q9Y5G3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGB1Q9Y5G3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGB1Q9Y5G3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCDHGB1Q9Y5G3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGB1Q9Y5G3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB1Q9Y5G3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB1Q9Y5G3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGB1Q9Y5G3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGB1Q9Y5G3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
PCDHGB1Q9Y5G3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB1Q9Y5G3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGB1Q9Y5G3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGB1Q9Y5G3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHGB1Q9Y5G3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB1Q9Y5G3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB1Q9Y5G3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGB1Q9Y5G3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGB1Q9Y5G3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 AL449106.1-201ENST00000608517 1980 ntBASIC23.49■■□□□ 1.35
PCDHGB1Q9Y5G3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGB1Q9Y5G3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB1Q9Y5G3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGB1Q9Y5G3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB1Q9Y5G3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGB1Q9Y5G3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDHGB1Q9Y5G3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB1Q9Y5G3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
PCDHGB1Q9Y5G3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB1Q9Y5G3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDHGB1Q9Y5G3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGB1Q9Y5G3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHGB1Q9Y5G3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB1Q9Y5G3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGB1Q9Y5G3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGB1Q9Y5G3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGB1Q9Y5G3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGB1Q9Y5G3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGB1Q9Y5G3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGB1Q9Y5G3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB1Q9Y5G3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB1Q9Y5G3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB1Q9Y5G3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGB1Q9Y5G3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 WASH5P-204ENST00000632292 975 ntBASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGB1Q9Y5G3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
PCDHGB1Q9Y5G3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms