Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TMEM40Q8WWA1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.69■■■□□ 2.18
TMEM40Q8WWA1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TMEM40Q8WWA1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TMEM40Q8WWA1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
TMEM40Q8WWA1 LINC00273-201ENST00000539813 1452 ntBASIC28.67■■■□□ 2.18
TMEM40Q8WWA1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TMEM40Q8WWA1 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TMEM40Q8WWA1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TMEM40Q8WWA1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.64■■■□□ 2.18
TMEM40Q8WWA1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TMEM40Q8WWA1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
TMEM40Q8WWA1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TMEM40Q8WWA1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TMEM40Q8WWA1 AL135925.1-201ENST00000605920 1701 ntBASIC28.6■■■□□ 2.17
TMEM40Q8WWA1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM40Q8WWA1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM40Q8WWA1 AC127502.1-201ENST00000399971 1502 ntBASIC28.58■■■□□ 2.17
TMEM40Q8WWA1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.57■■■□□ 2.16
TMEM40Q8WWA1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.57■■■□□ 2.16
TMEM40Q8WWA1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
TMEM40Q8WWA1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
TMEM40Q8WWA1 HSD17B1P1-201ENST00000590052 955 ntBASIC28.55■■■□□ 2.16
TMEM40Q8WWA1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TMEM40Q8WWA1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
TMEM40Q8WWA1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TMEM40Q8WWA1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.53■■■□□ 2.16
TMEM40Q8WWA1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
TMEM40Q8WWA1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TMEM40Q8WWA1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TMEM40Q8WWA1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TMEM40Q8WWA1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.5■■■□□ 2.15
TMEM40Q8WWA1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.49■■■□□ 2.15
TMEM40Q8WWA1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
TMEM40Q8WWA1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
TMEM40Q8WWA1 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.48■■■□□ 2.15
TMEM40Q8WWA1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.47■■■□□ 2.15
TMEM40Q8WWA1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TMEM40Q8WWA1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TMEM40Q8WWA1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.46■■■□□ 2.15
TMEM40Q8WWA1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
TMEM40Q8WWA1 WHAMMP2-203ENST00000563942 1603 ntBASIC28.45■■■□□ 2.14
TMEM40Q8WWA1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 AC135983.2-203ENST00000454486 1613 ntBASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM40Q8WWA1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
TMEM40Q8WWA1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.43■■■□□ 2.14
TMEM40Q8WWA1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
TMEM40Q8WWA1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM40Q8WWA1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TMEM40Q8WWA1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.4■■■□□ 2.14
TMEM40Q8WWA1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
TMEM40Q8WWA1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM40Q8WWA1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.36■■■□□ 2.13
TMEM40Q8WWA1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMEM40Q8WWA1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMEM40Q8WWA1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
TMEM40Q8WWA1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TMEM40Q8WWA1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TMEM40Q8WWA1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.33■■■□□ 2.13
TMEM40Q8WWA1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms