Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC41.49■■■■■ 4.23
CFAP43Q8NDM7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC41.49■■■■■ 4.23
CFAP43Q8NDM7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC41.48■■■■■ 4.23
CFAP43Q8NDM7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC41.47■■■■■ 4.23
CFAP43Q8NDM7 GPX1-201ENST00000419349 1106 ntBASIC41.47■■■■■ 4.23
CFAP43Q8NDM7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC41.45■■■■■ 4.23
CFAP43Q8NDM7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC41.45■■■■■ 4.23
CFAP43Q8NDM7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
CFAP43Q8NDM7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
CFAP43Q8NDM7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC41.44■■■■■ 4.22
CFAP43Q8NDM7 CHML-204ENST00000638121 920 ntTSL 2 BASIC41.44■■■■■ 4.22
CFAP43Q8NDM7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
CFAP43Q8NDM7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
CFAP43Q8NDM7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC41.4■■■■■ 4.22
CFAP43Q8NDM7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
CFAP43Q8NDM7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC41.39■■■■■ 4.22
CFAP43Q8NDM7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.21
CFAP43Q8NDM7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC41.38■■■■■ 4.21
CFAP43Q8NDM7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
CFAP43Q8NDM7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
CFAP43Q8NDM7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
CFAP43Q8NDM7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC41.37■■■■■ 4.21
CFAP43Q8NDM7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
CFAP43Q8NDM7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC41.36■■■■■ 4.21
CFAP43Q8NDM7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC41.36■■■■■ 4.21
CFAP43Q8NDM7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
CFAP43Q8NDM7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
CFAP43Q8NDM7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC41.34■■■■■ 4.21
CFAP43Q8NDM7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC41.34■■■■■ 4.21
CFAP43Q8NDM7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC41.34■■■■■ 4.21
CFAP43Q8NDM7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC41.34■■■■■ 4.21
CFAP43Q8NDM7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
CFAP43Q8NDM7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
CFAP43Q8NDM7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC41.33■■■■■ 4.21
CFAP43Q8NDM7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC41.32■■■■■ 4.2
CFAP43Q8NDM7 RNF126P1-201ENST00000567452 1320 ntBASIC41.3■■■■■ 4.2
CFAP43Q8NDM7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC41.3■■■■■ 4.2
CFAP43Q8NDM7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
CFAP43Q8NDM7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC41.29■■■■■ 4.2
CFAP43Q8NDM7 AC012354.3-201ENST00000623734 483 ntBASIC41.28■■■■■ 4.2
CFAP43Q8NDM7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC41.26■■■■■ 4.2
CFAP43Q8NDM7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC41.26■■■■■ 4.2
CFAP43Q8NDM7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC41.26■■■■■ 4.2
CFAP43Q8NDM7 NTF6A-201ENST00000591175 560 ntBASIC41.26■■■■■ 4.2
CFAP43Q8NDM7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC41.26■■■■■ 4.19
CFAP43Q8NDM7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC41.25■■■■■ 4.19
CFAP43Q8NDM7 AC010864.1-201ENST00000609407 1511 ntBASIC41.25■■■■■ 4.19
CFAP43Q8NDM7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC41.23■■■■■ 4.19
CFAP43Q8NDM7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC41.23■■■■■ 4.19
CFAP43Q8NDM7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
CFAP43Q8NDM7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC41.21■■■■■ 4.19
CFAP43Q8NDM7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC41.21■■■■■ 4.19
CFAP43Q8NDM7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC41.21■■■■■ 4.19
CFAP43Q8NDM7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.19
CFAP43Q8NDM7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC41.19■■■■■ 4.18
CFAP43Q8NDM7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC41.18■■■■■ 4.18
CFAP43Q8NDM7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC41.18■■■■■ 4.18
CFAP43Q8NDM7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC41.16■■■■■ 4.18
CFAP43Q8NDM7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
CFAP43Q8NDM7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC41.16■■■■■ 4.18
CFAP43Q8NDM7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC41.16■■■■■ 4.18
CFAP43Q8NDM7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.17
CFAP43Q8NDM7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC41.13■■■■■ 4.17
CFAP43Q8NDM7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC41.13■■■■■ 4.17
CFAP43Q8NDM7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC41.12■■■■■ 4.17
CFAP43Q8NDM7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC41.11■■■■■ 4.17
CFAP43Q8NDM7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC41.1■■■■■ 4.17
CFAP43Q8NDM7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC41.1■■■■■ 4.17
CFAP43Q8NDM7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
CFAP43Q8NDM7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
CFAP43Q8NDM7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC41.09■■■■■ 4.17
CFAP43Q8NDM7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC41.08■■■■■ 4.17
CFAP43Q8NDM7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC41.08■■■■■ 4.17
CFAP43Q8NDM7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.17
CFAP43Q8NDM7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC41.07■■■■■ 4.16
CFAP43Q8NDM7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC41.06■■■■■ 4.16
CFAP43Q8NDM7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
CFAP43Q8NDM7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC41.04■■■■■ 4.16
CFAP43Q8NDM7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC41.04■■■■■ 4.16
CFAP43Q8NDM7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC41.03■■■■■ 4.16
CFAP43Q8NDM7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC41.02■■■■■ 4.16
CFAP43Q8NDM7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC41.01■■■■■ 4.15
CFAP43Q8NDM7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC41■■■■■ 4.15
CFAP43Q8NDM7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC41■■■■■ 4.15
CFAP43Q8NDM7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
CFAP43Q8NDM7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC40.99■■■■■ 4.15
CFAP43Q8NDM7 LINC00273-201ENST00000539813 1452 ntBASIC40.98■■■■■ 4.15
CFAP43Q8NDM7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC40.98■■■■■ 4.15
CFAP43Q8NDM7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
CFAP43Q8NDM7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC40.97■■■■■ 4.15
CFAP43Q8NDM7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC40.95■■■■■ 4.15
CFAP43Q8NDM7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
CFAP43Q8NDM7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC40.95■■■■■ 4.15
CFAP43Q8NDM7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
CFAP43Q8NDM7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
CFAP43Q8NDM7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC40.94■■■■■ 4.14
CFAP43Q8NDM7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC40.94■■■■■ 4.14
CFAP43Q8NDM7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC40.94■■■■■ 4.14
CFAP43Q8NDM7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
CFAP43Q8NDM7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms