Protein–RNA interactions for Protein: Q8N5P1

ZC3H8, Zinc finger CCCH domain-containing protein 8, humanhuman

Known RBP eCLIP

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8Q8N5P1 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.27□□□□□ -1.418e-7■■■□□ 16
ZC3H8Q8N5P1 PPIA-207ENST00000481437 570 ntTSL 26.27□□□□□ -1.418e-7■■■□□ 16
ZC3H8Q8N5P1 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.165e-11■■■□□ 15.9
ZC3H8Q8N5P1 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.82□□□□□ -0.25e-11■■■□□ 15.9
ZC3H8Q8N5P1 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.23□□□□□ -0.295e-11■■■□□ 15.9
ZC3H8Q8N5P1 PPP1R8-204ENST00000431586 1029 ntTSL 312.25□□□□□ -0.455e-11■■■□□ 15.9
ZC3H8Q8N5P1 SCARNA1-201ENST00000517138 166 ntBASIC6.61□□□□□ -1.355e-11■■■□□ 15.9
ZC3H8Q8N5P1 TAF1D-207ENST00000527169 1127 ntTSL 517.87■□□□□ 0.453e-14■■■□□ 15.5
ZC3H8Q8N5P1 TAF1D-214ENST00000530089 1429 ntTSL 36.2□□□□□ -1.423e-14■■■□□ 15.5
ZC3H8Q8N5P1 TAF1D-218ENST00000533794 505 ntTSL 25.75□□□□□ -1.493e-14■■■□□ 15.5
ZC3H8Q8N5P1 TAF1D-212ENST00000529794 1123 ntTSL 25.71□□□□□ -1.53e-14■■■□□ 15.5
ZC3H8Q8N5P1 RPL4-202ENST00000561554 580 ntTSL 410.53□□□□□ -0.728e-29■■■□□ 15.4
ZC3H8Q8N5P1 RPL4-213ENST00000566624 819 ntTSL 210.41□□□□□ -0.748e-29■■■□□ 15.4
ZC3H8Q8N5P1 SNORD16-201ENST00000362803 99 ntBASIC6.47□□□□□ -1.378e-29■■■□□ 15.4
ZC3H8Q8N5P1 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 57.57□□□□□ -1.24e-10■■■□□ 15.2
ZC3H8Q8N5P1 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.364e-10■■■□□ 15.2
ZC3H8Q8N5P1 GABRE-202ENST00000417300 619 ntTSL 211.98□□□□□ -0.492e-6■■■□□ 15.1
ZC3H8Q8N5P1 UQCRC2-201ENST00000268379 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.72e-6■■■□□ 15.1
ZC3H8Q8N5P1 UQCRC2-204ENST00000563711 2008 ntTSL 28.82□□□□□ -12e-6■■■□□ 15.1
ZC3H8Q8N5P1 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.032e-6■■■□□ 15.1
ZC3H8Q8N5P1 GABRE-203ENST00000441219 1324 ntTSL 28.56□□□□□ -1.042e-6■■■□□ 15.1
ZC3H8Q8N5P1 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.94□□□□□ -1.142e-6■■■□□ 15.1
ZC3H8Q8N5P1 UQCRC2-211ENST00000567810 582 ntTSL 36.72□□□□□ -1.332e-6■■■□□ 15.1
ZC3H8Q8N5P1 UQCRC2-205ENST00000563898 1406 ntTSL 56.55□□□□□ -1.362e-6■■■□□ 15.1
ZC3H8Q8N5P1 RPL4-216ENST00000569438 565 ntTSL 514.3□□□□□ -0.128e-14■■■□□ 15.1
ZC3H8Q8N5P1 RPL4-212ENST00000566622 817 ntTSL 213.61□□□□□ -0.238e-14■■■□□ 15.1
ZC3H8Q8N5P1 RPL4-205ENST00000564439 582 ntTSL 310.79□□□□□ -0.688e-14■■■□□ 15.1
ZC3H8Q8N5P1 NEAT1-202ENST00000501122 22743 ntBASIC5.23□□□□□ -1.573e-7■■■□□ 15
ZC3H8Q8N5P1 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC10.05□□□□□ -0.81e-10■■■□□ 14.8
ZC3H8Q8N5P1 snoU18.1-201ENST00000629629 71 ntBASIC2.42□□□□□ -2.022e-13■■■□□ 14.8
ZC3H8Q8N5P1 SNORD18B-201ENST00000365659 72 ntBASIC1.74□□□□□ -2.132e-13■■■□□ 14.8
ZC3H8Q8N5P1 SNORD111B-201ENST00000408587 80 ntBASIC-2.57□□□□□ -2.822e-14■■■□□ 14.8
ZC3H8Q8N5P1 ZFAS1-207ENST00000458653 596 ntTSL 228.55■■■□□ 2.161e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)25.17■■□□□ 1.621e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)23.89■■□□□ 1.411e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)21.9■■□□□ 1.11e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.9■■□□□ 1.11e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-209ENST00000620594 508 ntTSL 37.62□□□□□ -1.191e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)7.09□□□□□ -1.271e-10■■■□□ 14.6
ZC3H8Q8N5P1 ZFAS1-204ENST00000428008 566 ntTSL 27.09□□□□□ -1.271e-10■■■□□ 14.6
ZC3H8Q8N5P1 CHD8-210ENST00000555962 1232 ntTSL 59.06□□□□□ -0.968e-17■■□□□ 14.5
ZC3H8Q8N5P1 SNORD8-201ENST00000363915 110 ntBASIC6.32□□□□□ -1.48e-17■■□□□ 14.5
ZC3H8Q8N5P1 MATR3-235ENST00000506147 580 ntTSL 415.99■□□□□ 0.154e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-239ENST00000514694 587 ntTSL 415.6■□□□□ 0.094e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-238ENST00000512107 579 ntTSL 414.79□□□□□ -0.044e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-203ENST00000506188 801 ntTSL 414.06□□□□□ -0.164e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-201ENST00000448190 542 ntTSL 413.58□□□□□ -0.244e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC13.25□□□□□ -0.294e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.324e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.74□□□□□ -0.374e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-236ENST00000509644 750 ntTSL 312.74□□□□□ -0.374e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-231ENST00000502394 589 ntTSL 412.28□□□□□ -0.444e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-234ENST00000505016 664 ntTSL 212.17□□□□□ -0.464e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-202ENST00000505522 629 ntTSL 1 (best)12.17□□□□□ -0.464e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-206ENST00000508735 310 ntTSL 1 (best)12.17□□□□□ -0.464e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-208ENST00000514110 679 ntTSL 1 (best)12.17□□□□□ -0.464e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-207ENST00000513259 444 ntTSL 58.74□□□□□ -1.014e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.46□□□□□ -1.064e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.064e-16■■□□□ 14.4
ZC3H8Q8N5P1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.57□□□□□ -1.364e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNHG4-205ENST00000507692 575 ntTSL 55.05□□□□□ -1.64e-16■■□□□ 14.4
ZC3H8Q8N5P1 SNORA74A-201ENST00000364089 198 ntBASIC4.99□□□□□ -1.614e-16■■□□□ 14.4
ZC3H8Q8N5P1 LRRC75A-AS1-228ENST00000584141 564 ntTSL 218.24■□□□□ 0.516e-8■■□□□ 14.3
ZC3H8Q8N5P1 LRRC75A-AS1-219ENST00000578757 920 ntTSL 1 (best)12.79□□□□□ -0.366e-8■■□□□ 14.3
ZC3H8Q8N5P1 RPL4-214ENST00000567229 2003 ntTSL 512□□□□□ -0.498e-8■■□□□ 14.3
ZC3H8Q8N5P1 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC11.25□□□□□ -0.618e-8■■□□□ 14.3
ZC3H8Q8N5P1 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.658e-8■■□□□ 14.3
ZC3H8Q8N5P1 RPL4-217ENST00000569696 569 ntTSL 510.41□□□□□ -0.748e-8■■□□□ 14.3
ZC3H8Q8N5P1 RPL4-210ENST00000566039 1099 ntTSL 28.56□□□□□ -1.048e-8■■□□□ 14.3
ZC3H8Q8N5P1 RPL4-203ENST00000561775 1396 ntTSL 57.84□□□□□ -1.158e-8■■□□□ 14.3
ZC3H8Q8N5P1 PFKL-205ENST00000466134 5986 ntTSL 221.96■■□□□ 1.115e-6■■□□□ 14.2
ZC3H8Q8N5P1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.855e-6■■□□□ 14.2
ZC3H8Q8N5P1 PFKL-206ENST00000467315 1947 ntTSL 219.75■□□□□ 0.755e-6■■□□□ 14.2
ZC3H8Q8N5P1 PFKL-207ENST00000474114 6007 ntTSL 1 (best)19.7■□□□□ 0.745e-6■■□□□ 14.2
ZC3H8Q8N5P1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.535e-6■■□□□ 14.2
ZC3H8Q8N5P1 PFKL-211ENST00000498841 3122 ntTSL 1 (best)17.37■□□□□ 0.375e-6■■□□□ 14.2
ZC3H8Q8N5P1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.295e-6■■□□□ 14.2
ZC3H8Q8N5P1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.8■□□□□ 0.285e-6■■□□□ 14.2
ZC3H8Q8N5P1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.31■□□□□ 0.25e-6■■□□□ 14.2
ZC3H8Q8N5P1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.84■□□□□ 0.135e-6■■□□□ 14.2
ZC3H8Q8N5P1 PFKL-202ENST00000397961 3390 ntTSL 1 (best)15.83■□□□□ 0.135e-6■■□□□ 14.2
ZC3H8Q8N5P1 PFKL-204ENST00000460521 2818 ntTSL 215.02■□□□□ -05e-6■■□□□ 14.2
ZC3H8Q8N5P1 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.395e-6■■□□□ 14.2
ZC3H8Q8N5P1 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.61□□□□□ -1.035e-6■■□□□ 14.2
ZC3H8Q8N5P1 HSPD1-214ENST00000491249 860 ntTSL 27.33□□□□□ -1.245e-6■■□□□ 14.2
ZC3H8Q8N5P1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.13e-7■■□□□ 13.9
ZC3H8Q8N5P1 MAST2-202ENST00000372008 2528 ntTSL 512.12□□□□□ -0.473e-7■■□□□ 13.9
ZC3H8Q8N5P1 MAST2-207ENST00000482881 858 ntTSL 38.91□□□□□ -0.983e-7■■□□□ 13.9
ZC3H8Q8N5P1 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC7.83□□□□□ -1.162e-35■■□□□ 13.9
ZC3H8Q8N5P1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.26■□□□□ 0.519e-26■■□□□ 13.8
ZC3H8Q8N5P1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.38■□□□□ 0.059e-26■■□□□ 13.8
ZC3H8Q8N5P1 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC8.1□□□□□ -1.119e-26■■□□□ 13.8
ZC3H8Q8N5P1 RPSA-203ENST00000444512 701 ntTSL 219.29■□□□□ 0.681e-323■■□□□ 13.7
ZC3H8Q8N5P1 RPSA-207ENST00000478027 1227 ntTSL 211.57□□□□□ -0.561e-323■■□□□ 13.7
ZC3H8Q8N5P1 RPSA-204ENST00000458478 874 ntTSL 211.22□□□□□ -0.611e-323■■□□□ 13.7
ZC3H8Q8N5P1 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.791e-323■■□□□ 13.7
ZC3H8Q8N5P1 RPSA-206ENST00000477325 596 ntTSL 29.02□□□□□ -0.971e-323■■□□□ 13.7
ZC3H8Q8N5P1 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.231e-323■■□□□ 13.7
ZC3H8Q8N5P1 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -21e-323■■□□□ 13.7
ZC3H8Q8N5P1 RPL4-207ENST00000564647 1110 ntTSL 27.13□□□□□ -1.271e-7■■□□□ 13.7
Retrieved 100 of 950 protein–RNA pairs in 19.9 ms