RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 AEBP2Q6ZN18 517 aaPredicted RBP38,59■■■■□ 3,77
MALAT1-217ENST00000620902 CHIC1Q5VXU3 224 aa37,52■■■■□ 3,6
MALAT1-217ENST00000620902 PHF23Q9BUL5 403 aaPredicted RBP32,92■■■□□ 2,86
MALAT1-217ENST00000620902 SENP3Q9H4L4 574 aaPredicted RBP32,9■■■□□ 2,86
MALAT1-217ENST00000620902 FOXD1Q16676 465 aa30,48■■■□□ 2,47
MALAT1-217ENST00000620902 PLPPR3Q6T4P5 718 aa30,4■■■□□ 2,46
MALAT1-217ENST00000620902 PPP6R1Q9UPN7 881 aa29,11■■■□□ 2,25
MALAT1-217ENST00000620902 ADRA2BP18089 450 aa29,08■■■□□ 2,25
MALAT1-217ENST00000620902 PIAS4Q8N2W9 510 aaPredicted RBP28,71■■■□□ 2,19
MALAT1-217ENST00000620902 MSH5O43196 834 aa28,31■■■□□ 2,12
MALAT1-217ENST00000620902 SCAF1Q9H7N4 1312 aaKnown RBP26,76■■□□□ 1,87
MALAT1-217ENST00000620902 PPP4R3CPQ6ZMV5 832 aa26,71■■□□□ 1,87
MALAT1-217ENST00000620902 MAPK8IP2Q13387 824 aaPredicted RBP26,44■■□□□ 1,82
MALAT1-217ENST00000620902 DMRT2Q9Y5R5 561 aa26,2■■□□□ 1,78
MALAT1-217ENST00000620902 POTEDQ86YR6 584 aa26,12■■□□□ 1,77
MALAT1-217ENST00000620902 CNKSR2Q8WXI2 1034 aa26,07■■□□□ 1,76
MALAT1-217ENST00000620902 NCBP3Q53F19 620 aaKnown RBP26,03■■□□□ 1,76
MALAT1-217ENST00000620902 KCNA4P22459 653 aa25,77■■□□□ 1,72
MALAT1-217ENST00000620902 RNF216Q9NWF9 866 aaPredicted RBP25,62■■□□□ 1,69
MALAT1-217ENST00000620902 HOXD11P31277 338 aaPredicted RBP25,57■■□□□ 1,68
MALAT1-217ENST00000620902 NPM3O75607 178 aaKnown RBP25,54■■□□□ 1,68
MALAT1-217ENST00000620902 DCAF8L1A6NGE4 600 aa25,03■■□□□ 1,6
MALAT1-217ENST00000620902 DNAJC5BQ9UF47 199 aa24,96■■□□□ 1,59
MALAT1-217ENST00000620902 SLC4A1APQ9BWU0 796 aaKnown RBP24,54■■□□□ 1,52
MALAT1-217ENST00000620902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24,36■■□□□ 1,49
MALAT1-217ENST00000620902 RNF39Q9H2S5 420 aa24,19■■□□□ 1,46
MALAT1-217ENST00000620902 SLC4A2P04920 1241 aa24,17■■□□□ 1,46
MALAT1-217ENST00000620902 C1QBPQ07021 282 aaKnown RBP23,94■■□□□ 1,42
MALAT1-217ENST00000620902 U3KPZ7 1027 aaPredicted RBP23,9■■□□□ 1,42
MALAT1-217ENST00000620902 FOXD4L1Q9NU39 408 aa23,84■■□□□ 1,41
MALAT1-217ENST00000620902 CACNB1Q02641 598 aaPredicted RBP23,74■■□□□ 1,39
MALAT1-217ENST00000620902 ZBTB22O15209 634 aa23,67■■□□□ 1,38
MALAT1-217ENST00000620902 MYCNP04198 464 aaPredicted RBP23,66■■□□□ 1,38
MALAT1-217ENST00000620902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23,64■■□□□ 1,37
MALAT1-217ENST00000620902 HNRNPUL2Q1KMD3 747 aaKnown RBP23,64■■□□□ 1,37
MALAT1-217ENST00000620902 SAMD1Q6SPF0 538 aaPredicted RBP23,51■■□□□ 1,35
MALAT1-217ENST00000620902 EHMT2Q96KQ7 1210 aa23,48■■□□□ 1,35
MALAT1-217ENST00000620902 APLP2Q06481 763 aa23,47■■□□□ 1,35
MALAT1-217ENST00000620902 CSRNP3Q8WYN3 585 aa23,37■■□□□ 1,33
MALAT1-217ENST00000620902 SPINK5Q9NQ38 1064 aaPredicted RBP23,27■■□□□ 1,32
MALAT1-217ENST00000620902 CAPN15O75808 1086 aa23,24■■□□□ 1,31
MALAT1-217ENST00000620902 ZNF219Q9P2Y4 722 aaPredicted RBP23,12■■□□□ 1,29
MALAT1-217ENST00000620902 ATXN8OSP0DMR3 200 aa23,11■■□□□ 1,29
MALAT1-217ENST00000620902 TRHP20396 242 aaPredicted RBP23,06■■□□□ 1,28
MALAT1-217ENST00000620902 ATF5Q9Y2D1 282 aaPredicted RBP22,94■■□□□ 1,26
MALAT1-217ENST00000620902 DSG3P32926 999 aa22,91■■□□□ 1,26
MALAT1-217ENST00000620902 ABCB7O75027 752 aa22,72■■□□□ 1,23
MALAT1-217ENST00000620902 POLA2Q14181 598 aa22,65■■□□□ 1,22
MALAT1-217ENST00000620902 ZBTB12Q9Y330 459 aaPredicted RBP22,35■■□□□ 1,17
MALAT1-217ENST00000620902 FBLN2P98095 1184 aa22,12■■□□□ 1,13
MALAT1-217ENST00000620902 MKRN4PQ13434 485 aaPredicted RBP21,96■■□□□ 1,11
MALAT1-217ENST00000620902 RBM42Q9BTD8 480 aaKnown RBP21,92■■□□□ 1,1
MALAT1-217ENST00000620902 OSCARQ8IYS5 282 aa21,85■■□□□ 1,09
MALAT1-217ENST00000620902 SPDYE2BA6NHP3 402 aa21,69■■□□□ 1,06
MALAT1-217ENST00000620902 SPDYE6P0CI01 402 aa21,69■■□□□ 1,06
MALAT1-217ENST00000620902 SPDYE2Q495Y8 402 aa21,69■■□□□ 1,06
MALAT1-217ENST00000620902 AKT1S1Q96B36 256 aa21,58■■□□□ 1,05
MALAT1-217ENST00000620902 ZNF692Q9BU19 519 aaPredicted RBP21,54■■□□□ 1,04
MALAT1-217ENST00000620902 SSUH2Q9Y2M2 353 aa21,46■■□□□ 1,03
MALAT1-217ENST00000620902 SPDYE4A6NLX3 237 aa21,4■■□□□ 1,02
MALAT1-217ENST00000620902 REM2Q8IYK8 340 aaPredicted RBP21,32■■□□□ 1
MALAT1-217ENST00000620902 ABCC9O60706 1549 aa21,32■■□□□ 1
MALAT1-217ENST00000620902 NISCHQ9Y2I1 1504 aa21,3■■□□□ 1
MALAT1-217ENST00000620902 PABPN1Q86U42 306 aaKnown RBP eCLIP21,22■□□□□ 0,99
MALAT1-217ENST00000620902 FKBP8Q14318 412 aa21,15■□□□□ 0,98
MALAT1-217ENST00000620902 SPDYE1Q8NFV5 336 aaPredicted RBP21,11■□□□□ 0,97
MALAT1-217ENST00000620902 PITPNM1O00562 1244 aa21,06■□□□□ 0,96
MALAT1-217ENST00000620902 CHRDL2Q6WN34 429 aa21,04■□□□□ 0,96
MALAT1-217ENST00000620902 PROM2Q8N271 834 aa21,02■□□□□ 0,96
MALAT1-217ENST00000620902 CLEC11AQ9Y240 323 aa20,96■□□□□ 0,95
MALAT1-217ENST00000620902 STAG3Q9UJ98 1225 aa20,92■□□□□ 0,94
MALAT1-217ENST00000620902 PRR29P0C7W0 189 aa20,79■□□□□ 0,92
MALAT1-217ENST00000620902 FXR2P51116 673 aaKnown RBP eCLIP20,75■□□□□ 0,91
MALAT1-217ENST00000620902 DNAJC5Q9H3Z4 198 aa20,72■□□□□ 0,91
MALAT1-217ENST00000620902 PIP4P2Q8N4L2 257 aa20,7■□□□□ 0,9
MALAT1-217ENST00000620902 POTEHQ6S545 545 aa20,66■□□□□ 0,9
MALAT1-217ENST00000620902 FBXO3Q9UK99 471 aa20,58■□□□□ 0,89
MALAT1-217ENST00000620902 PRKAR2AP13861 404 aaKnown RBP20,54■□□□□ 0,88
MALAT1-217ENST00000620902 CHADLQ6NUI6 762 aa20,44■□□□□ 0,86
MALAT1-217ENST00000620902 CREBZFQ9NS37 354 aa20,42■□□□□ 0,86
MALAT1-217ENST00000620902 MIER1Q8N108 512 aa20,34■□□□□ 0,85
MALAT1-217ENST00000620902 PLEKHG5O94827 1062 aa20,33■□□□□ 0,85
MALAT1-217ENST00000620902 FARP1Q9Y4F1 1045 aaPredicted RBP20,29■□□□□ 0,84
MALAT1-217ENST00000620902 PLCD3Q8N3E9 789 aa20,28■□□□□ 0,84
MALAT1-217ENST00000620902 VASPP50552 380 aaPredicted RBP20,22■□□□□ 0,83
MALAT1-217ENST00000620902 NPM1P06748 294 aaKnown RBP eCLIP20,17■□□□□ 0,82
MALAT1-217ENST00000620902 MNX1P50219 401 aaPredicted RBP20,17■□□□□ 0,82
MALAT1-217ENST00000620902 ZBTB47Q9UFB7 747 aaPredicted RBP20,15■□□□□ 0,82
MALAT1-217ENST00000620902 HAX1O00165 279 aa20,13■□□□□ 0,81
MALAT1-217ENST00000620902 C19orf67A6NJJ6 358 aa20,05■□□□□ 0,8
MALAT1-217ENST00000620902 KLHL34Q8N239 644 aa19,95■□□□□ 0,78
MALAT1-217ENST00000620902 CD44P16070 742 aaKnown RBP19,94■□□□□ 0,78
MALAT1-217ENST00000620902 IFNLR1Q8IU57 520 aaPredicted RBP19,9■□□□□ 0,78
MALAT1-217ENST00000620902 PAK3O75914 559 aaPredicted RBP19,88■□□□□ 0,77
MALAT1-217ENST00000620902 EVX2Q03828 476 aa19,86■□□□□ 0,77
MALAT1-217ENST00000620902 NUBP1P53384 320 aa19,82■□□□□ 0,76
MALAT1-217ENST00000620902 CCDC180Q9P1Z9 1646 aa19,82■□□□□ 0,76
MALAT1-217ENST00000620902 ZRANB1Q9UGI0 708 aa19,79■□□□□ 0,76
MALAT1-217ENST00000620902 RASEFQ8IZ41 740 aa19,77■□□□□ 0,76
MALAT1-217ENST00000620902 SP7Q8TDD2 431 aaPredicted RBP19,77■□□□□ 0,76
Retrieved 100 of 20,778 RNA–protein pairs in 9,9 ms