Protein–RNA interactions for Protein: Q71SY5

MED25, Mediator of RNA polymerase II transcription subunit 25, humanhuman

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED25Q71SY5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
MED25Q71SY5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.65■■□□□ 1.54
MED25Q71SY5 AC016575.1-201ENST00000607026 382 ntBASIC24.65■■□□□ 1.54
MED25Q71SY5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.65■■□□□ 1.54
MED25Q71SY5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.64■■□□□ 1.54
MED25Q71SY5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
MED25Q71SY5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MED25Q71SY5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.63■■□□□ 1.53
MED25Q71SY5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
MED25Q71SY5 ST7-AS1-201ENST00000456775 1889 ntBASIC24.63■■□□□ 1.53
MED25Q71SY5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MED25Q71SY5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MED25Q71SY5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MED25Q71SY5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MED25Q71SY5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
MED25Q71SY5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MED25Q71SY5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.6■■□□□ 1.53
MED25Q71SY5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
MED25Q71SY5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MED25Q71SY5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MED25Q71SY5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
MED25Q71SY5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.59■■□□□ 1.53
MED25Q71SY5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MED25Q71SY5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
MED25Q71SY5 CR559946.2-201ENST00000623684 991 ntBASIC24.58■■□□□ 1.53
MED25Q71SY5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MED25Q71SY5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.56■■□□□ 1.52
MED25Q71SY5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.56■■□□□ 1.52
MED25Q71SY5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MED25Q71SY5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MED25Q71SY5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
MED25Q71SY5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
MED25Q71SY5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.54■■□□□ 1.52
MED25Q71SY5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
MED25Q71SY5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MED25Q71SY5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MED25Q71SY5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MED25Q71SY5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MED25Q71SY5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MED25Q71SY5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MED25Q71SY5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
MED25Q71SY5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MED25Q71SY5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MED25Q71SY5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MED25Q71SY5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.49■■□□□ 1.51
MED25Q71SY5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MED25Q71SY5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.48■■□□□ 1.51
MED25Q71SY5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
MED25Q71SY5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
MED25Q71SY5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MED25Q71SY5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.47■■□□□ 1.51
MED25Q71SY5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.47■■□□□ 1.51
MED25Q71SY5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
MED25Q71SY5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.46■■□□□ 1.51
MED25Q71SY5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L13-201ENST00000554103 1267 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L15-201ENST00000611059 1267 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L23-201ENST00000615195 1269 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L24-201ENST00000617576 1269 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L22-201ENST00000618238 1269 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L20-201ENST00000619712 1269 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L21-201ENST00000622058 1269 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L10-201ENST00000622460 1267 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 DUX4L25-201ENST00000624915 1269 ntBASIC24.46■■□□□ 1.51
MED25Q71SY5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MED25Q71SY5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
MED25Q71SY5 AC127502.1-201ENST00000399971 1502 ntBASIC24.45■■□□□ 1.5
MED25Q71SY5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MED25Q71SY5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
MED25Q71SY5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MED25Q71SY5 LINC00273-201ENST00000539813 1452 ntBASIC24.44■■□□□ 1.5
MED25Q71SY5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
MED25Q71SY5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
MED25Q71SY5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
MED25Q71SY5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
MED25Q71SY5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
MED25Q71SY5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.43■■□□□ 1.5
MED25Q71SY5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MED25Q71SY5 ABCB10P1-201ENST00000614297 2181 ntBASIC24.42■■□□□ 1.5
MED25Q71SY5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.42■■□□□ 1.5
MED25Q71SY5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MED25Q71SY5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
MED25Q71SY5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MED25Q71SY5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
MED25Q71SY5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.39■■□□□ 1.5
MED25Q71SY5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.39■■□□□ 1.49
MED25Q71SY5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
MED25Q71SY5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MED25Q71SY5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MED25Q71SY5 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.38■■□□□ 1.49
MED25Q71SY5 HSD17B1P1-201ENST00000590052 955 ntBASIC24.38■■□□□ 1.49
MED25Q71SY5 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.38■■□□□ 1.49
MED25Q71SY5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MED25Q71SY5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.36■■□□□ 1.49
MED25Q71SY5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
MED25Q71SY5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MED25Q71SY5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
MED25Q71SY5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MED25Q71SY5 AP004833.2-201ENST00000532228 1454 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms