Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CASC1Q6TDU7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CASC1Q6TDU7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CASC1Q6TDU7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.55■■■□□ 2.64
CASC1Q6TDU7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CASC1Q6TDU7 DRD5P2-201ENST00000421395 2012 ntBASIC31.53■■■□□ 2.64
CASC1Q6TDU7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
CASC1Q6TDU7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
CASC1Q6TDU7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CASC1Q6TDU7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CASC1Q6TDU7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CASC1Q6TDU7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CASC1Q6TDU7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CASC1Q6TDU7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CASC1Q6TDU7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CASC1Q6TDU7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CASC1Q6TDU7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CASC1Q6TDU7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.5■■■□□ 2.63
CASC1Q6TDU7 AP004833.2-201ENST00000532228 1454 ntBASIC31.5■■■□□ 2.63
CASC1Q6TDU7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CASC1Q6TDU7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASC1Q6TDU7 MIR762-201ENST00000390236 83 ntBASIC31.48■■■□□ 2.63
CASC1Q6TDU7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CASC1Q6TDU7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.47■■■□□ 2.63
CASC1Q6TDU7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.47■■■□□ 2.63
CASC1Q6TDU7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
CASC1Q6TDU7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CASC1Q6TDU7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
CASC1Q6TDU7 AC127502.1-201ENST00000399971 1502 ntBASIC31.46■■■□□ 2.63
CASC1Q6TDU7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.46■■■□□ 2.63
CASC1Q6TDU7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.46■■■□□ 2.63
CASC1Q6TDU7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CASC1Q6TDU7 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.45■■■□□ 2.63
CASC1Q6TDU7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CASC1Q6TDU7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CASC1Q6TDU7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CASC1Q6TDU7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
CASC1Q6TDU7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CASC1Q6TDU7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.42■■■□□ 2.62
CASC1Q6TDU7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.42■■■□□ 2.62
CASC1Q6TDU7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CASC1Q6TDU7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CASC1Q6TDU7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CASC1Q6TDU7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CASC1Q6TDU7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.37■■■□□ 2.61
CASC1Q6TDU7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASC1Q6TDU7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASC1Q6TDU7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASC1Q6TDU7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CASC1Q6TDU7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CASC1Q6TDU7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CASC1Q6TDU7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.36■■■□□ 2.61
CASC1Q6TDU7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CASC1Q6TDU7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CASC1Q6TDU7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CASC1Q6TDU7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CASC1Q6TDU7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.35■■■□□ 2.61
CASC1Q6TDU7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CASC1Q6TDU7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CASC1Q6TDU7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CASC1Q6TDU7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CASC1Q6TDU7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.34■■■□□ 2.61
CASC1Q6TDU7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CASC1Q6TDU7 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.33■■■□□ 2.61
CASC1Q6TDU7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CASC1Q6TDU7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.32■■■□□ 2.6
CASC1Q6TDU7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CASC1Q6TDU7 AC005559.1-201ENST00000589661 871 ntBASIC31.32■■■□□ 2.6
CASC1Q6TDU7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CASC1Q6TDU7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CASC1Q6TDU7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
CASC1Q6TDU7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.31■■■□□ 2.6
CASC1Q6TDU7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC31.31■■■□□ 2.6
CASC1Q6TDU7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CASC1Q6TDU7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CASC1Q6TDU7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CASC1Q6TDU7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CASC1Q6TDU7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CASC1Q6TDU7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CASC1Q6TDU7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CASC1Q6TDU7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CASC1Q6TDU7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CASC1Q6TDU7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CASC1Q6TDU7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.27■■■□□ 2.6
CASC1Q6TDU7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
CASC1Q6TDU7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CASC1Q6TDU7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.25■■■□□ 2.59
CASC1Q6TDU7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.25■■■□□ 2.59
CASC1Q6TDU7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CASC1Q6TDU7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CASC1Q6TDU7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.24■■■□□ 2.59
CASC1Q6TDU7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.24■■■□□ 2.59
CASC1Q6TDU7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CASC1Q6TDU7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms