Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
AP3D1O14617 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
AP3D1O14617 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24■■□□□ 1.43
AP3D1O14617 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
AP3D1O14617 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.99■■□□□ 1.43
AP3D1O14617 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
AP3D1O14617 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
AP3D1O14617 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
AP3D1O14617 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.98■■□□□ 1.43
AP3D1O14617 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
AP3D1O14617 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
AP3D1O14617 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
AP3D1O14617 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.98■■□□□ 1.43
AP3D1O14617 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
AP3D1O14617 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
AP3D1O14617 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
AP3D1O14617 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.97■■□□□ 1.43
AP3D1O14617 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
AP3D1O14617 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.96■■□□□ 1.43
AP3D1O14617 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.96■■□□□ 1.43
AP3D1O14617 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.96■■□□□ 1.43
AP3D1O14617 AC142086.6-201ENST00000621154 1765 ntBASIC23.96■■□□□ 1.43
AP3D1O14617 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.95■■□□□ 1.42
AP3D1O14617 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
AP3D1O14617 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
AP3D1O14617 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
AP3D1O14617 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
AP3D1O14617 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
AP3D1O14617 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.93■■□□□ 1.42
AP3D1O14617 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
AP3D1O14617 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.93■■□□□ 1.42
AP3D1O14617 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
AP3D1O14617 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
AP3D1O14617 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
AP3D1O14617 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
AP3D1O14617 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
AP3D1O14617 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.9■■□□□ 1.42
AP3D1O14617 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
AP3D1O14617 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
AP3D1O14617 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
AP3D1O14617 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
AP3D1O14617 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
AP3D1O14617 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.89■■□□□ 1.41
AP3D1O14617 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
AP3D1O14617 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
AP3D1O14617 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
AP3D1O14617 AC005559.1-201ENST00000589661 871 ntBASIC23.88■■□□□ 1.41
AP3D1O14617 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
AP3D1O14617 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.87■■□□□ 1.41
AP3D1O14617 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
AP3D1O14617 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
AP3D1O14617 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
AP3D1O14617 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
AP3D1O14617 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
AP3D1O14617 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.86■■□□□ 1.41
AP3D1O14617 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
AP3D1O14617 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
AP3D1O14617 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
AP3D1O14617 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.85■■□□□ 1.41
AP3D1O14617 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
AP3D1O14617 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
AP3D1O14617 DRD5P2-201ENST00000421395 2012 ntBASIC23.84■■□□□ 1.41
AP3D1O14617 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
AP3D1O14617 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
AP3D1O14617 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
AP3D1O14617 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.84■■□□□ 1.41
AP3D1O14617 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
AP3D1O14617 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
AP3D1O14617 AC135731.1-201ENST00000569415 2548 ntBASIC23.83■■□□□ 1.41
AP3D1O14617 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
AP3D1O14617 DUX4L28-201ENST00000623687 678 ntBASIC23.82■■□□□ 1.4
AP3D1O14617 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
AP3D1O14617 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
AP3D1O14617 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
AP3D1O14617 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.81■■□□□ 1.4
AP3D1O14617 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
AP3D1O14617 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.79■■□□□ 1.4
AP3D1O14617 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.79■■□□□ 1.4
AP3D1O14617 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
AP3D1O14617 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.78■■□□□ 1.4
AP3D1O14617 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.78■■□□□ 1.4
AP3D1O14617 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.78■■□□□ 1.4
AP3D1O14617 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
AP3D1O14617 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
AP3D1O14617 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.78■■□□□ 1.4
AP3D1O14617 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
AP3D1O14617 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.77■■□□□ 1.4
AP3D1O14617 AC127502.1-201ENST00000399971 1502 ntBASIC23.77■■□□□ 1.4
AP3D1O14617 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
AP3D1O14617 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
AP3D1O14617 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
AP3D1O14617 AP004833.2-201ENST00000532228 1454 ntBASIC23.76■■□□□ 1.39
AP3D1O14617 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.76■■□□□ 1.39
AP3D1O14617 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
AP3D1O14617 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
AP3D1O14617 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
AP3D1O14617 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.75■■□□□ 1.39
AP3D1O14617 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
AP3D1O14617 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
AP3D1O14617 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms