Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHISA3A0PJX4 BX255925.1-201ENST00000566954 1854 ntBASIC22.74■■□□□ 1.23
SHISA3A0PJX4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.74■■□□□ 1.23
SHISA3A0PJX4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SHISA3A0PJX4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SHISA3A0PJX4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.73■■□□□ 1.23
SHISA3A0PJX4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA3A0PJX4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA3A0PJX4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
SHISA3A0PJX4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SHISA3A0PJX4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.71■■□□□ 1.23
SHISA3A0PJX4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
SHISA3A0PJX4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.7■■□□□ 1.22
SHISA3A0PJX4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SHISA3A0PJX4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 AC010864.1-201ENST00000609407 1511 ntBASIC22.69■■□□□ 1.22
SHISA3A0PJX4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.69■■□□□ 1.22
SHISA3A0PJX4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.68■■□□□ 1.22
SHISA3A0PJX4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.68■■□□□ 1.22
SHISA3A0PJX4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA3A0PJX4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHISA3A0PJX4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SHISA3A0PJX4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.68■■□□□ 1.22
SHISA3A0PJX4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA3A0PJX4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA3A0PJX4 WASH5P-204ENST00000632292 975 ntBASIC22.67■■□□□ 1.22
SHISA3A0PJX4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA3A0PJX4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHISA3A0PJX4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHISA3A0PJX4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SHISA3A0PJX4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SHISA3A0PJX4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SHISA3A0PJX4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SHISA3A0PJX4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SHISA3A0PJX4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.63■■□□□ 1.21
SHISA3A0PJX4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHISA3A0PJX4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.63■■□□□ 1.21
SHISA3A0PJX4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHISA3A0PJX4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHISA3A0PJX4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.62■■□□□ 1.21
SHISA3A0PJX4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.61■■□□□ 1.21
SHISA3A0PJX4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHISA3A0PJX4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHISA3A0PJX4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.61■■□□□ 1.21
SHISA3A0PJX4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHISA3A0PJX4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.6■■□□□ 1.21
SHISA3A0PJX4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.6■■□□□ 1.21
SHISA3A0PJX4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHISA3A0PJX4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHISA3A0PJX4 AL449106.1-201ENST00000608517 1980 ntBASIC22.58■■□□□ 1.21
SHISA3A0PJX4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.58■■□□□ 1.21
SHISA3A0PJX4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHISA3A0PJX4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHISA3A0PJX4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHISA3A0PJX4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SHISA3A0PJX4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHISA3A0PJX4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.56■■□□□ 1.2
SHISA3A0PJX4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.56■■□□□ 1.2
SHISA3A0PJX4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.56■■□□□ 1.2
SHISA3A0PJX4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHISA3A0PJX4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.55■■□□□ 1.2
SHISA3A0PJX4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHISA3A0PJX4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
SHISA3A0PJX4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHISA3A0PJX4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SHISA3A0PJX4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHISA3A0PJX4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHISA3A0PJX4 LINC01003-201ENST00000564834 1764 ntBASIC22.54■■□□□ 1.2
SHISA3A0PJX4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHISA3A0PJX4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.54■■□□□ 1.2
SHISA3A0PJX4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHISA3A0PJX4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.53■■□□□ 1.2
SHISA3A0PJX4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.53■■□□□ 1.2
SHISA3A0PJX4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SHISA3A0PJX4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHISA3A0PJX4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHISA3A0PJX4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHISA3A0PJX4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.48■■□□□ 1.19
SHISA3A0PJX4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SHISA3A0PJX4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHISA3A0PJX4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
SHISA3A0PJX4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHISA3A0PJX4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms