Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLIRPQ9GZT3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLIRPQ9GZT3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 AL031848.2-201ENST00000607670 837 ntBASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.58■□□□□ 0.4
SLIRPQ9GZT3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 AC009237.14-201ENST00000609975 1594 ntBASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLIRPQ9GZT3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 AC006333.2-201ENST00000607957 2099 ntBASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLIRPQ9GZT3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 AC061975.6-201ENST00000579045 1553 ntBASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 YBX1P4-201ENST00000392794 808 ntBASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SLIRPQ9GZT3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms