Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 AL024507.2-201ENST00000606070 2574 ntBASIC21.18■□□□□ 0.98
RNF135Q8IUD6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF135Q8IUD6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 FAM197Y1-201ENST00000421178 764 ntBASIC21.17■□□□□ 0.98
RNF135Q8IUD6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 RBM17P1-201ENST00000453646 1190 ntBASIC21.17■□□□□ 0.98
RNF135Q8IUD6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.17■□□□□ 0.98
RNF135Q8IUD6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 HTR7P1-201ENST00000538670 1336 ntBASIC21.17■□□□□ 0.98
RNF135Q8IUD6 LINC01568-207ENST00000641790 1380 ntBASIC21.17■□□□□ 0.98
RNF135Q8IUD6 AC087633.2-202ENST00000565166 1439 ntBASIC21.17■□□□□ 0.98
RNF135Q8IUD6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF135Q8IUD6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 TERF1P1-201ENST00000311003 1181 ntBASIC21.16■□□□□ 0.98
RNF135Q8IUD6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 AL390719.1-204ENST00000412397 1219 ntBASIC21.16■□□□□ 0.98
RNF135Q8IUD6 AL137013.1-201ENST00000432946 1228 ntBASIC21.16■□□□□ 0.98
RNF135Q8IUD6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 AC087388.1-201ENST00000571370 1112 ntBASIC21.16■□□□□ 0.98
RNF135Q8IUD6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF135Q8IUD6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF135Q8IUD6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF135Q8IUD6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF135Q8IUD6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RNF135Q8IUD6 AC079598.2-202ENST00000546624 1451 ntBASIC21.14■□□□□ 0.98
RNF135Q8IUD6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF135Q8IUD6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms