Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 AC009237.14-201ENST00000609975 1594 ntBASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRTM1Q86UE6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRTM1Q86UE6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 AC027612.3-201ENST00000413684 1047 ntBASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRTM1Q86UE6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 AC093503.3-201ENST00000624917 2352 ntBASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 SLC7A5P1-201ENST00000568957 537 ntBASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRTM1Q86UE6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms