Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 AC061975.6-201ENST00000579045 1553 ntBASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 AP004607.4-201ENST00000530158 1459 ntBASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC6LQ2NKX8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 UNC93B8-201ENST00000511903 705 ntBASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
ERCC6LQ2NKX8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 GUSBP5-201ENST00000418136 578 ntBASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 KRT16P3-201ENST00000439127 1283 ntBASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ERCC6LQ2NKX8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 AP000997.3-201ENST00000623333 2250 ntBASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 AC135050.7-201ENST00000624508 2218 ntBASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC6LQ2NKX8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms