Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.587e-8■■■□□ 15.3
NCBP2P52298 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.477e-8■■■□□ 15.3
NCBP2P52298 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.447e-8■■■□□ 15.3
NCBP2P52298 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.67■□□□□ 0.427e-8■■■□□ 15.3
NCBP2P52298 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.15■□□□□ 0.347e-8■■■□□ 15.3
NCBP2P52298 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.237e-8■■■□□ 15.3
NCBP2P52298 C19orf25-212ENST00000592605 357 ntTSL 316.37■□□□□ 0.217e-8■■■□□ 15.3
NCBP2P52298 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.37■□□□□ 0.217e-8■■■□□ 15.3
NCBP2P52298 C19orf25-208ENST00000589421 492 ntTSL 214.71□□□□□ -0.057e-8■■■□□ 15.3
NCBP2P52298 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.79□□□□□ -0.367e-8■■■□□ 15.3
NCBP2P52298 ORC2-201ENST00000234296 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.797e-8■■■□□ 15.3
NCBP2P52298 ORC2-205ENST00000467605 568 ntTSL 38.13□□□□□ -1.117e-8■■■□□ 15.3
NCBP2P52298 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC10.55□□□□□ -0.723e-13■■■□□ 15.3
NCBP2P52298 SNHG1-209ENST00000538654 2768 ntTSL 28.32□□□□□ -1.083e-13■■■□□ 15.3
NCBP2P52298 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.66□□□□□ -1.663e-13■■■□□ 15.3
NCBP2P52298 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.5□□□□□ -1.853e-13■■■□□ 15.3
NCBP2P52298 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.562e-10■■■□□ 15.3
NCBP2P52298 CCNB1IP1-216ENST00000557665 1331 ntTSL 59.71□□□□□ -0.862e-10■■■□□ 15.3
NCBP2P52298 CCNB1IP1-212ENST00000555963 573 ntTSL 49.32□□□□□ -0.922e-10■■■□□ 15.3
NCBP2P52298 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.042e-10■■■□□ 15.3
NCBP2P52298 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.112e-10■■■□□ 15.3
NCBP2P52298 CCNB1IP1-214ENST00000556854 1294 ntTSL 57.29□□□□□ -1.242e-10■■■□□ 15.3
NCBP2P52298 CCNB1IP1-211ENST00000555348 505 ntTSL 42.32□□□□□ -2.042e-10■■■□□ 15.3
NCBP2P52298 SEPT9-222ENST00000589070 582 ntTSL 316.81■□□□□ 0.281e-6■■■□□ 15.3
NCBP2P52298 SEPT9-240ENST00000591833 576 ntTSL 412.92□□□□□ -0.341e-6■■■□□ 15.3
NCBP2P52298 NPLOC4-215ENST00000574095 277 ntTSL 323.79■■□□□ 1.49e-8■■■□□ 15.3
NCBP2P52298 NPLOC4-217ENST00000574897 2365 ntTSL 222.4■■□□□ 1.189e-8■■■□□ 15.3
NCBP2P52298 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.529e-8■■■□□ 15.3
NCBP2P52298 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.92□□□□□ -0.59e-8■■■□□ 15.3
NCBP2P52298 NPLOC4-203ENST00000570300 565 ntTSL 410.35□□□□□ -0.759e-8■■■□□ 15.3
NCBP2P52298 RPS13-203ENST00000525828 664 ntTSL 215.55■□□□□ 0.083e-8■■■□□ 15.3
NCBP2P52298 RPS13-206ENST00000528074 583 ntTSL 215.31■□□□□ 0.043e-8■■■□□ 15.3
NCBP2P52298 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.98□□□□□ -0.016e-38■■■□□ 15.3
NCBP2P52298 RPS13-205ENST00000527571 777 ntTSL 214.88□□□□□ -0.033e-8■■■□□ 15.3
NCBP2P52298 RBM39-215ENST00000442447 644 ntTSL 214.85□□□□□ -0.037e-61■■■□□ 15.3
NCBP2P52298 RBM39-204ENST00000374038 1026 ntTSL 514.59□□□□□ -0.076e-38■■■□□ 15.3
NCBP2P52298 RBM39-219ENST00000453310 1068 ntTSL 214.59□□□□□ -0.076e-38■■■□□ 15.3
NCBP2P52298 RBM39-213ENST00000433027 611 ntTSL 514.46□□□□□ -0.096e-38■■■□□ 15.3
NCBP2P52298 RBM39-224ENST00000463098 869 ntTSL 213.86□□□□□ -0.196e-38■■■□□ 15.3
NCBP2P52298 RBM39-212ENST00000429968 2149 ntTSL 213.18□□□□□ -0.36e-38■■■□□ 15.3
NCBP2P52298 RPS13-204ENST00000526895 561 ntTSL 313.12□□□□□ -0.313e-8■■■□□ 15.3
NCBP2P52298 RBM39-216ENST00000444878 2124 ntTSL 212.96□□□□□ -0.336e-38■■■□□ 15.3
NCBP2P52298 RPS13-210ENST00000534329 568 ntTSL 212.77□□□□□ -0.373e-8■■■□□ 15.3
NCBP2P52298 RBM39-222ENST00000461849 861 ntTSL 212.71□□□□□ -0.376e-38■■■□□ 15.3
NCBP2P52298 RBM39-207ENST00000412738 1018 ntTSL 312.58□□□□□ -0.43e-8■■■□□ 15.3
NCBP2P52298 RPS13-209ENST00000533969 355 ntTSL 312.5□□□□□ -0.413e-8■■■□□ 15.3
NCBP2P52298 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.11□□□□□ -0.476e-38■■■□□ 15.3
NCBP2P52298 RBM39-245ENST00000639702 5914 ntTSL 512.02□□□□□ -0.496e-38■■■□□ 15.3
NCBP2P52298 RBM39-223ENST00000463004 4580 ntTSL 511.38□□□□□ -0.596e-38■■■□□ 15.3
NCBP2P52298 RBM39-206ENST00000403542 2883 ntTSL 211.31□□□□□ -0.66e-38■■■□□ 15.3
NCBP2P52298 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.66e-38■■■□□ 15.3
NCBP2P52298 RBM39-202ENST00000338163 2792 ntTSL 211.04□□□□□ -0.646e-38■■■□□ 15.3
NCBP2P52298 RPS13-201ENST00000228140 491 ntTSL 2 BASIC9.54□□□□□ -0.883e-8■■■□□ 15.3
NCBP2P52298 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.083e-8■■■□□ 15.3
NCBP2P52298 H2AFY-208ENST00000506218 758 ntTSL 321.92■■□□□ 1.11e-12■■■□□ 15.3
NCBP2P52298 H2AFY-211ENST00000507868 861 ntTSL 221.81■■□□□ 1.081e-12■■■□□ 15.3
NCBP2P52298 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.81■■□□□ 1.081e-12■■■□□ 15.3
NCBP2P52298 H2AFY-212ENST00000508120 536 ntTSL 320.82■□□□□ 0.921e-12■■■□□ 15.3
NCBP2P52298 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.831e-12■■■□□ 15.3
NCBP2P52298 H2AFY-210ENST00000506671 1905 ntTSL 517.37■□□□□ 0.371e-12■■■□□ 15.3
NCBP2P52298 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.12■□□□□ 0.011e-12■■■□□ 15.3
NCBP2P52298 H2AFY-213ENST00000508785 966 ntTSL 214.82□□□□□ -0.041e-12■■■□□ 15.3
NCBP2P52298 H2AFY-203ENST00000360597 1772 ntTSL 513.27□□□□□ -0.291e-12■■■□□ 15.3
NCBP2P52298 H2AFY-209ENST00000506532 677 ntTSL 212.69□□□□□ -0.381e-12■■■□□ 15.3
NCBP2P52298 H2AFY-214ENST00000508962 293 ntTSL 311.48□□□□□ -0.571e-12■■■□□ 15.3
NCBP2P52298 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.691e-12■■■□□ 15.3
NCBP2P52298 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.951e-12■■■□□ 15.3
NCBP2P52298 ANAPC5-222ENST00000545801 1281 ntTSL 212.46□□□□□ -0.414e-15■■■□□ 15.3
NCBP2P52298 ANAPC5-205ENST00000534976 3165 ntTSL 59.37□□□□□ -0.914e-15■■■□□ 15.3
NCBP2P52298 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.766e-7■■■□□ 15.3
NCBP2P52298 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 518.86■□□□□ 0.616e-7■■■□□ 15.3
NCBP2P52298 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.236e-7■■■□□ 15.3
NCBP2P52298 ESYT2-205ENST00000497111 663 ntTSL 414.17□□□□□ -0.146e-7■■■□□ 15.3
NCBP2P52298 NBEAL1-210ENST00000497505 2372 ntTSL 511.9□□□□□ -0.513e-11■■■□□ 15.3
NCBP2P52298 NBEAL1-207ENST00000478884 1012 ntTSL 1 (best)8.01□□□□□ -1.133e-11■■■□□ 15.3
NCBP2P52298 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.93e-11■■■□□ 15.3
NCBP2P52298 SLIRP-207ENST00000556831 729 ntTSL 213.02□□□□□ -0.337e-14■■■□□ 15.3
NCBP2P52298 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.64□□□□□ -0.397e-14■■■□□ 15.3
NCBP2P52298 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.427e-14■■■□□ 15.3
NCBP2P52298 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC11.53□□□□□ -0.567e-14■■■□□ 15.3
NCBP2P52298 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC11.53□□□□□ -0.567e-14■■■□□ 15.3
NCBP2P52298 SLIRP-212ENST00000613856 420 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.697e-14■■■□□ 15.3
NCBP2P52298 SLIRP-204ENST00000555890 471 ntTSL 26.38□□□□□ -1.397e-14■■■□□ 15.3
NCBP2P52298 SLIRP-203ENST00000554074 445 ntTSL 35.98□□□□□ -1.457e-14■■■□□ 15.3
NCBP2P52298 FAM35A-203ENST00000437629 969 ntTSL 321.93■■□□□ 1.13e-7■■■□□ 15.3
NCBP2P52298 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.73e-7■■■□□ 15.3
NCBP2P52298 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.15□□□□□ -1.93e-7■■■□□ 15.3
NCBP2P52298 KMT5B-211ENST00000458496 556 ntTSL 424.16■■□□□ 1.464e-6■■■□□ 15.3
NCBP2P52298 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.96■□□□□ 0.634e-6■■■□□ 15.3
NCBP2P52298 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.38■□□□□ 0.374e-6■■■□□ 15.3
NCBP2P52298 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.45■□□□□ 0.224e-6■■■□□ 15.3
NCBP2P52298 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-7■■■□□ 15.3
NCBP2P52298 KMT5B-212ENST00000466295 638 ntTSL 213.04□□□□□ -0.324e-6■■■□□ 15.3
NCBP2P52298 CELF1-213ENST00000530151 583 ntTSL 319.99■□□□□ 0.791e-8■■■□□ 15.2
NCBP2P52298 CELF1-210ENST00000526419 476 ntTSL 416.73■□□□□ 0.271e-8■■■□□ 15.2
NCBP2P52298 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.21e-8■■■□□ 15.2
NCBP2P52298 CELF1-208ENST00000525841 622 ntTSL 513.57□□□□□ -0.241e-8■■■□□ 15.2
NCBP2P52298 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.51□□□□□ -0.251e-8■■■□□ 15.2
NCBP2P52298 CPSF1-202ENST00000527827 619 ntTSL 221.15■□□□□ 0.985e-6■■■□□ 15.2
NCBP2P52298 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 05e-6■■■□□ 15.2
Retrieved 100 of 18,329 protein–RNA pairs in 132 ms