RNA–Protein interactions for RNA: ENST00000508962.1

H2AFY-214, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-214ENST00000508962 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
H2AFY-214ENST00000508962 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
H2AFY-214ENST00000508962 ABCC9O60706 1549 aa24.3■■□□□ 1.48
H2AFY-214ENST00000508962 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
H2AFY-214ENST00000508962 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
H2AFY-214ENST00000508962 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
H2AFY-214ENST00000508962 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
H2AFY-214ENST00000508962 NACADO15069 1562 aa23.77■■□□□ 1.4
H2AFY-214ENST00000508962 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
H2AFY-214ENST00000508962 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
H2AFY-214ENST00000508962 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
H2AFY-214ENST00000508962 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
H2AFY-214ENST00000508962 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
H2AFY-214ENST00000508962 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
H2AFY-214ENST00000508962 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
H2AFY-214ENST00000508962 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
H2AFY-214ENST00000508962 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
H2AFY-214ENST00000508962 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
H2AFY-214ENST00000508962 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
H2AFY-214ENST00000508962 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
H2AFY-214ENST00000508962 SMARCA2P51531 1590 aa22■■□□□ 1.11
H2AFY-214ENST00000508962 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
H2AFY-214ENST00000508962 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
H2AFY-214ENST00000508962 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
H2AFY-214ENST00000508962 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
H2AFY-214ENST00000508962 WIZO95785 1651 aa21.84■■□□□ 1.09
H2AFY-214ENST00000508962 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
H2AFY-214ENST00000508962 SUPT5HO00267 1087 aaKnown RBP21.83■■□□□ 1.09
H2AFY-214ENST00000508962 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
H2AFY-214ENST00000508962 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.08
H2AFY-214ENST00000508962 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
H2AFY-214ENST00000508962 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
H2AFY-214ENST00000508962 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
H2AFY-214ENST00000508962 CFTRP13569 1480 aa21.26■□□□□ 0.99
H2AFY-214ENST00000508962 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
H2AFY-214ENST00000508962 PDS5BQ9NTI5 1447 aa21.15■□□□□ 0.98
H2AFY-214ENST00000508962 NESP48681 1621 aa21.12■□□□□ 0.97
H2AFY-214ENST00000508962 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
H2AFY-214ENST00000508962 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
H2AFY-214ENST00000508962 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
H2AFY-214ENST00000508962 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
H2AFY-214ENST00000508962 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
H2AFY-214ENST00000508962 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
H2AFY-214ENST00000508962 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
H2AFY-214ENST00000508962 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
H2AFY-214ENST00000508962 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
H2AFY-214ENST00000508962 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
H2AFY-214ENST00000508962 WDR62O43379 1518 aa20.73■□□□□ 0.91
H2AFY-214ENST00000508962 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
H2AFY-214ENST00000508962 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
H2AFY-214ENST00000508962 CUX1P39880 1505 aa20.71■□□□□ 0.91
H2AFY-214ENST00000508962 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
H2AFY-214ENST00000508962 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
H2AFY-214ENST00000508962 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
H2AFY-214ENST00000508962 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
H2AFY-214ENST00000508962 SYNJ1O43426 1573 aa20.64■□□□□ 0.9
H2AFY-214ENST00000508962 CUX2O14529 1486 aa20.62■□□□□ 0.89
H2AFY-214ENST00000508962 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
H2AFY-214ENST00000508962 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.89
H2AFY-214ENST00000508962 SOGA1O94964 1423 aa20.54■□□□□ 0.88
H2AFY-214ENST00000508962 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
H2AFY-214ENST00000508962 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
H2AFY-214ENST00000508962 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
H2AFY-214ENST00000508962 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
H2AFY-214ENST00000508962 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
H2AFY-214ENST00000508962 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
H2AFY-214ENST00000508962 EEA1Q15075 1411 aa20.36■□□□□ 0.85
H2AFY-214ENST00000508962 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
H2AFY-214ENST00000508962 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
H2AFY-214ENST00000508962 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
H2AFY-214ENST00000508962 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
H2AFY-214ENST00000508962 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
H2AFY-214ENST00000508962 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
H2AFY-214ENST00000508962 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
H2AFY-214ENST00000508962 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
H2AFY-214ENST00000508962 IGF1RP08069 1367 aa20.21■□□□□ 0.83
H2AFY-214ENST00000508962 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
H2AFY-214ENST00000508962 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
H2AFY-214ENST00000508962 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
H2AFY-214ENST00000508962 PBRM1Q86U86 1689 aa20.14■□□□□ 0.81
H2AFY-214ENST00000508962 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
H2AFY-214ENST00000508962 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
H2AFY-214ENST00000508962 CUL7Q14999 1698 aa20.12■□□□□ 0.81
H2AFY-214ENST00000508962 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
H2AFY-214ENST00000508962 CARMIL1Q5VZK9 1371 aa20.1■□□□□ 0.81
H2AFY-214ENST00000508962 SYNJ2O15056 1496 aa20.07■□□□□ 0.8
H2AFY-214ENST00000508962 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
H2AFY-214ENST00000508962 ADAMTS12P58397 1594 aa20.06■□□□□ 0.8
H2AFY-214ENST00000508962 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
H2AFY-214ENST00000508962 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
H2AFY-214ENST00000508962 KIF21BO75037 1637 aa19.99■□□□□ 0.79
H2AFY-214ENST00000508962 FBLN2P98095 1184 aa19.99■□□□□ 0.79
H2AFY-214ENST00000508962 GRIN2AQ12879 1464 aa19.97■□□□□ 0.79
H2AFY-214ENST00000508962 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
H2AFY-214ENST00000508962 NUP160Q12769 1436 aa19.87■□□□□ 0.77
H2AFY-214ENST00000508962 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
H2AFY-214ENST00000508962 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
H2AFY-214ENST00000508962 CHD1O14646 1710 aa19.85■□□□□ 0.77
H2AFY-214ENST00000508962 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
H2AFY-214ENST00000508962 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms