Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.7□□□□□ -0.06
CKS2P33552 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.7□□□□□ -0.06
CKS2P33552 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.7□□□□□ -0.06
CKS2P33552 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CKS2P33552 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKS2P33552 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CKS2P33552 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CKS2P33552 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CKS2P33552 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CKS2P33552 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.69□□□□□ -0.06
CKS2P33552 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.69□□□□□ -0.06
CKS2P33552 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.69□□□□□ -0.06
CKS2P33552 SRD5A1P1-201ENST00000442297 786 ntBASIC14.69□□□□□ -0.06
CKS2P33552 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.69□□□□□ -0.06
CKS2P33552 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.69□□□□□ -0.06
CKS2P33552 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.69□□□□□ -0.06
CKS2P33552 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.69□□□□□ -0.06
CKS2P33552 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKS2P33552 SYT6-210ENST00000641643 1587 ntBASIC14.68□□□□□ -0.06
CKS2P33552 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS2P33552 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CKS2P33552 Z82202.1-201ENST00000623446 1880 ntBASIC14.68□□□□□ -0.06
CKS2P33552 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS2P33552 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
CKS2P33552 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS2P33552 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS2P33552 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.68□□□□□ -0.06
CKS2P33552 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKS2P33552 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CKS2P33552 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 LETM1P2-201ENST00000597330 2178 ntBASIC14.67□□□□□ -0.06
CKS2P33552 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CKS2P33552 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CKS2P33552 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.67□□□□□ -0.06
CKS2P33552 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS2P33552 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS2P33552 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.67□□□□□ -0.06
CKS2P33552 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.67□□□□□ -0.06
CKS2P33552 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CKS2P33552 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms