Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.265e-9■□□□□ 10.5
NKRFO15226 RNF4-210ENST00000508235 603 ntTSL 317.2■□□□□ 0.345e-9■□□□□ 10.5
NKRFO15226 UBAP2L-209ENST00000437652 911 ntTSL 330.51■■■□□ 2.475e-9■□□□□ 10.5
NKRFO15226 UBAP2L-205ENST00000412596 980 ntTSL 530.19■■■□□ 2.425e-9■□□□□ 10.5
NKRFO15226 UBAP2L-211ENST00000456325 812 ntTSL 320.39■□□□□ 0.855e-9■□□□□ 10.5
NKRFO15226 UBAP2L-210ENST00000441890 678 ntTSL 220.05■□□□□ 0.85e-9■□□□□ 10.5
NKRFO15226 UBAP2L-204ENST00000368504 1120 ntTSL 516.16■□□□□ 0.185e-9■□□□□ 10.5
NKRFO15226 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC12.11□□□□□ -0.475e-9■□□□□ 10.5
NKRFO15226 UBAP2L-207ENST00000428931 3988 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.475e-9■□□□□ 10.5
NKRFO15226 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC9.88□□□□□ -0.835e-9■□□□□ 10.5
NKRFO15226 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.66□□□□□ -0.865e-9■□□□□ 10.5
NKRFO15226 UBALD1-205ENST00000590891 2641 ntBASIC19.08■□□□□ 0.653e-8■□□□□ 10.5
NKRFO15226 TAOK1-205ENST00000583121 526 ntTSL 310.97□□□□□ -0.651e-7■□□□□ 10.5
NKRFO15226 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC8.71□□□□□ -1.021e-7■□□□□ 10.5
NKRFO15226 MXD4-202ENST00000510822 561 ntTSL 319.44■□□□□ 0.71e-6■□□□□ 10.5
NKRFO15226 MXD4-205ENST00000515378 522 ntTSL 217.22■□□□□ 0.351e-6■□□□□ 10.5
NKRFO15226 LINC00963-210ENST00000608272 612 ntTSL 515.47■□□□□ 0.073e-7■□□□□ 10.5
NKRFO15226 LINC00963-213ENST00000622120 355 ntTSL 514.48□□□□□ -0.093e-7■□□□□ 10.5
NKRFO15226 LINC00963-206ENST00000453213 469 ntTSL 310.17□□□□□ -0.783e-7■□□□□ 10.5
NKRFO15226 LINC00963-209ENST00000607931 473 ntTSL 59.86□□□□□ -0.833e-7■□□□□ 10.5
NKRFO15226 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.337e-10■□□□□ 10.5
NKRFO15226 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.717e-10■□□□□ 10.5
NKRFO15226 AP2A2-205ENST00000525796 551 ntTSL 523.05■■□□□ 1.289e-12■□□□□ 10.5
NKRFO15226 AP2A2-218ENST00000529858 550 ntTSL 422.48■■□□□ 1.199e-12■□□□□ 10.5
NKRFO15226 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.129e-12■□□□□ 10.5
NKRFO15226 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.542e-7■□□□□ 10.5
NKRFO15226 SMG5-204ENST00000476954 1161 ntTSL 218.24■□□□□ 0.512e-7■□□□□ 10.5
NKRFO15226 AP2A2-217ENST00000529818 549 ntTSL 412.13□□□□□ -0.479e-12■□□□□ 10.5
NKRFO15226 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.13■■□□□ 1.454e-7■□□□□ 10.5
NKRFO15226 ARFRP1-211ENST00000618568 1612 ntTSL 323.16■■□□□ 1.34e-7■□□□□ 10.5
NKRFO15226 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.78■□□□□ 0.924e-7■□□□□ 10.5
NKRFO15226 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.644e-7■□□□□ 10.5
NKRFO15226 TRIOBP-209ENST00000428075 931 ntTSL 232.51■■■□□ 2.795e-6■□□□□ 10.5
NKRFO15226 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.425e-6■□□□□ 10.5
NKRFO15226 TRIOBP-206ENST00000413051 904 ntTSL 525.81■■□□□ 1.725e-6■□□□□ 10.5
NKRFO15226 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.685e-6■□□□□ 10.5
NKRFO15226 BMI1-209ENST00000602523 748 ntTSL 1 (best)25.23■■□□□ 1.632e-8■□□□□ 10.5
NKRFO15226 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.482e-8■□□□□ 10.5
NKRFO15226 PIK3CA-204ENST00000477735 245 ntTSL 421.93■■□□□ 1.12e-8■□□□□ 10.5
NKRFO15226 FBXO34-204ENST00000555087 612 ntTSL 421.37■■□□□ 1.012e-8■□□□□ 10.5
NKRFO15226 COMMD3-BMI1-201ENST00000417470 745 ntTSL 520.07■□□□□ 0.82e-8■□□□□ 10.5
NKRFO15226 COMMD3-BMI1-204ENST00000489125 329 ntTSL 218.79■□□□□ 0.62e-8■□□□□ 10.5
NKRFO15226 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.522e-8■□□□□ 10.5
NKRFO15226 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.01■□□□□ 0.312e-8■□□□□ 10.5
NKRFO15226 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.064e-6■□□□□ 10.5
NKRFO15226 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.032e-8■□□□□ 10.5
NKRFO15226 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.37□□□□□ -0.112e-8■□□□□ 10.5
NKRFO15226 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.162e-8■□□□□ 10.5
NKRFO15226 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.172e-8■□□□□ 10.5
NKRFO15226 TRIOBP-202ENST00000344404 7300 ntTSL 212.41□□□□□ -0.425e-6■□□□□ 10.5
NKRFO15226 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.615e-6■□□□□ 10.5
NKRFO15226 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.792e-8■□□□□ 10.5
NKRFO15226 FBXO34-206ENST00000557647 434 ntTSL 39.1□□□□□ -0.952e-8■□□□□ 10.5
NKRFO15226 COMMD3-BMI1-203ENST00000475460 508 ntTSL 28.79□□□□□ -12e-8■□□□□ 10.5
NKRFO15226 COMMD3-BMI1-206ENST00000602395 621 ntTSL 27.81□□□□□ -1.162e-8■□□□□ 10.5
NKRFO15226 BMI1-205ENST00000456675 550 ntTSL 25.62□□□□□ -1.512e-8■□□□□ 10.5
NKRFO15226 COMMD3-BMI1-202ENST00000463409 605 ntTSL 35.44□□□□□ -1.542e-8■□□□□ 10.5
NKRFO15226 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.962e-8■□□□□ 10.5
NKRFO15226 SMG1P3-202ENST00000437413 589 ntTSL 425.1■■□□□ 1.615e-7■□□□□ 10.5
NKRFO15226 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.3■□□□□ 0.525e-7■□□□□ 10.5
NKRFO15226 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.11■■□□□ 1.771e-7■□□□□ 10.5
NKRFO15226 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.281e-7■□□□□ 10.5
NKRFO15226 PTTG1IP-207ENST00000494690 612 ntTSL 514.13□□□□□ -0.159e-7■□□□□ 10.4
NKRFO15226 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.537e-9■□□□□ 10.4
NKRFO15226 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.479e-7■□□□□ 10.4
NKRFO15226 PTMA-208ENST00000448874 1108 ntTSL 219.45■□□□□ 0.73e-7■□□□□ 10.4
NKRFO15226 PTMA-212ENST00000481928 1635 ntTSL 318.89■□□□□ 0.623e-7■□□□□ 10.4
NKRFO15226 PTMA-211ENST00000468027 621 ntTSL 1 (best)14.98□□□□□ -0.013e-7■□□□□ 10.4
NKRFO15226 PTMA-209ENST00000466801 784 ntTSL 512.27□□□□□ -0.453e-7■□□□□ 10.4
NKRFO15226 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.493e-7■□□□□ 10.4
NKRFO15226 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.513e-7■□□□□ 10.4
NKRFO15226 PTMA-203ENST00000409321 735 ntTSL 3 BASIC11.79□□□□□ -0.523e-7■□□□□ 10.4
NKRFO15226 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.633e-7■□□□□ 10.4
NKRFO15226 ST7-215ENST00000438863 1005 ntTSL 531.22■■■□□ 2.598e-7■□□□□ 10.4
NKRFO15226 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.538e-7■□□□□ 10.4
NKRFO15226 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.66■■■□□ 2.58e-7■□□□□ 10.4
NKRFO15226 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.49■■■□□ 2.478e-7■□□□□ 10.4
NKRFO15226 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.49■■■□□ 2.478e-7■□□□□ 10.4
NKRFO15226 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.07■■□□□ 1.68e-7■□□□□ 10.4
NKRFO15226 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.03■■□□□ 1.128e-7■□□□□ 10.4
NKRFO15226 ST7-217ENST00000446490 1694 ntTSL 58.73□□□□□ -1.018e-7■□□□□ 10.4
NKRFO15226 ST7-216ENST00000443979 805 ntTSL 58.15□□□□□ -1.18e-7■□□□□ 10.4
NKRFO15226 ST7-209ENST00000417919 577 ntTSL 45.77□□□□□ -1.498e-7■□□□□ 10.4
NKRFO15226 AL355987.4-202ENST00000459985 1900 ntTSL 225.82■■□□□ 1.722e-8■□□□□ 10.4
NKRFO15226 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.25■□□□□ 0.512e-8■□□□□ 10.4
NKRFO15226 PTPRG-205ENST00000475527 2694 ntTSL 522.4■■□□□ 1.181e-6■□□□□ 10.4
NKRFO15226 PTPRG-207ENST00000495879 3011 ntTSL 1 (best)21.02■□□□□ 0.961e-6■□□□□ 10.4
NKRFO15226 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.351e-6■□□□□ 10.4
NKRFO15226 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.651e-6■□□□□ 10.4
NKRFO15226 SELENOO-202ENST00000492092 1626 ntTSL 1 (best)22.31■■□□□ 1.167e-10■□□□□ 10.4
NKRFO15226 ASPSCR1-214ENST00000582404 534 ntTSL 320.38■□□□□ 0.856e-15■□□□□ 10.4
NKRFO15226 PTBP1-211ENST00000587094 273 ntTSL 313.36□□□□□ -0.273e-8■□□□□ 10.4
NKRFO15226 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.093e-10■□□□□ 10.4
NKRFO15226 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC9.94□□□□□ -0.822e-6■□□□□ 10.4
NKRFO15226 NINL-204ENST00000461642 594 ntTSL 317.24■□□□□ 0.353e-6■□□□□ 10.4
NKRFO15226 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.86■□□□□ 0.615e-9■□□□□ 10.4
NKRFO15226 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.395e-9■□□□□ 10.4
NKRFO15226 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.325e-9■□□□□ 10.4
NKRFO15226 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.225e-9■□□□□ 10.4
NKRFO15226 ASXL1-205ENST00000497249 296 ntTSL 53.59□□□□□ -1.835e-9■□□□□ 10.4
Retrieved 100 of 9,198 protein–RNA pairs in 97.1 ms