RNA–Protein interactions for RNA: ENST00000489125.2

COMMD3-BMI1-204, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-204ENST00000489125 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
COMMD3-BMI1-204ENST00000489125 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
COMMD3-BMI1-204ENST00000489125 ABCC9O60706 1549 aa35.16■■■■□ 3.22
COMMD3-BMI1-204ENST00000489125 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
COMMD3-BMI1-204ENST00000489125 NACADO15069 1562 aa33.64■■■□□ 2.98
COMMD3-BMI1-204ENST00000489125 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
COMMD3-BMI1-204ENST00000489125 DCAF8L2P0C7V8 631 aa33.36■■■□□ 2.93
COMMD3-BMI1-204ENST00000489125 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
COMMD3-BMI1-204ENST00000489125 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
COMMD3-BMI1-204ENST00000489125 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
COMMD3-BMI1-204ENST00000489125 PABPN1Q86U42 306 aaKnown RBP eCLIP32.77■■■□□ 2.84
COMMD3-BMI1-204ENST00000489125 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.83
COMMD3-BMI1-204ENST00000489125 DNAJC5BQ9UF47 199 aa32.66■■■□□ 2.82
COMMD3-BMI1-204ENST00000489125 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
COMMD3-BMI1-204ENST00000489125 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
COMMD3-BMI1-204ENST00000489125 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
COMMD3-BMI1-204ENST00000489125 CC2D2AQ9P2K1 1620 aa31.84■■■□□ 2.69
COMMD3-BMI1-204ENST00000489125 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
COMMD3-BMI1-204ENST00000489125 NCAPD3P42695 1498 aa31.05■■■□□ 2.56
COMMD3-BMI1-204ENST00000489125 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
COMMD3-BMI1-204ENST00000489125 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
COMMD3-BMI1-204ENST00000489125 BAZ1AQ9NRL2 1556 aaPredicted RBP30.95■■■□□ 2.54
COMMD3-BMI1-204ENST00000489125 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
COMMD3-BMI1-204ENST00000489125 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
COMMD3-BMI1-204ENST00000489125 PEG3Q9GZU2 1588 aa30.79■■■□□ 2.52
COMMD3-BMI1-204ENST00000489125 BAZ1BQ9UIG0 1483 aaKnown RBP30.67■■■□□ 2.5
COMMD3-BMI1-204ENST00000489125 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
COMMD3-BMI1-204ENST00000489125 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
COMMD3-BMI1-204ENST00000489125 NESP48681 1621 aa30.3■■■□□ 2.44
COMMD3-BMI1-204ENST00000489125 CUX2O14529 1486 aa30.3■■■□□ 2.44
COMMD3-BMI1-204ENST00000489125 WIZO95785 1651 aa30.3■■■□□ 2.44
COMMD3-BMI1-204ENST00000489125 LAMC3Q9Y6N6 1575 aa30.29■■■□□ 2.44
COMMD3-BMI1-204ENST00000489125 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
COMMD3-BMI1-204ENST00000489125 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
COMMD3-BMI1-204ENST00000489125 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
COMMD3-BMI1-204ENST00000489125 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.39
COMMD3-BMI1-204ENST00000489125 THOC2Q8NI27 1593 aaKnown RBP29.99■■■□□ 2.39
COMMD3-BMI1-204ENST00000489125 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
COMMD3-BMI1-204ENST00000489125 CFTRP13569 1480 aa29.84■■■□□ 2.37
COMMD3-BMI1-204ENST00000489125 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
COMMD3-BMI1-204ENST00000489125 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
COMMD3-BMI1-204ENST00000489125 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
COMMD3-BMI1-204ENST00000489125 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
COMMD3-BMI1-204ENST00000489125 WDR62O43379 1518 aa29.71■■■□□ 2.35
COMMD3-BMI1-204ENST00000489125 CCDC88BA6NC98 1476 aa29.64■■■□□ 2.34
COMMD3-BMI1-204ENST00000489125 PRDM2Q13029 1718 aa29.58■■■□□ 2.33
COMMD3-BMI1-204ENST00000489125 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
COMMD3-BMI1-204ENST00000489125 ABCC8Q09428 1581 aa29.27■■■□□ 2.28
COMMD3-BMI1-204ENST00000489125 TOPBP1Q92547 1522 aa29.2■■■□□ 2.26
COMMD3-BMI1-204ENST00000489125 IFT140Q96RY7 1462 aa29.16■■■□□ 2.26
COMMD3-BMI1-204ENST00000489125 DNMBPQ6XZF7 1577 aa29.14■■■□□ 2.26
COMMD3-BMI1-204ENST00000489125 SUPT5HO00267 1087 aaKnown RBP29.02■■■□□ 2.24
COMMD3-BMI1-204ENST00000489125 ZNF608Q9ULD9 1512 aaPredicted RBP28.97■■■□□ 2.23
COMMD3-BMI1-204ENST00000489125 OSCARQ8IYS5 282 aa28.95■■■□□ 2.22
COMMD3-BMI1-204ENST00000489125 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
COMMD3-BMI1-204ENST00000489125 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
COMMD3-BMI1-204ENST00000489125 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
COMMD3-BMI1-204ENST00000489125 SOGA1O94964 1423 aa28.8■■■□□ 2.2
COMMD3-BMI1-204ENST00000489125 CUX1P39880 1505 aa28.79■■■□□ 2.2
COMMD3-BMI1-204ENST00000489125 AQRO60306 1485 aaKnown RBP eCLIP28.77■■■□□ 2.26e-7■■■■□ 23.4
COMMD3-BMI1-204ENST00000489125 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
COMMD3-BMI1-204ENST00000489125 WDR97A6NE52 1622 aa28.76■■■□□ 2.2
COMMD3-BMI1-204ENST00000489125 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
COMMD3-BMI1-204ENST00000489125 TDRD9Q8NDG6 1382 aaKnown RBP28.64■■■□□ 2.18
COMMD3-BMI1-204ENST00000489125 CHD1O14646 1710 aa28.57■■■□□ 2.16
COMMD3-BMI1-204ENST00000489125 TRIM41Q8WV44 630 aa28.54■■■□□ 2.16
COMMD3-BMI1-204ENST00000489125 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
COMMD3-BMI1-204ENST00000489125 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
COMMD3-BMI1-204ENST00000489125 MAGI1Q96QZ7 1491 aaPredicted RBP28.52■■■□□ 2.16
COMMD3-BMI1-204ENST00000489125 SNAPC4Q5SXM2 1469 aa28.49■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 BIVM-ERCC5R4GMW8 1640 aa28.49■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 WRNQ14191 1432 aaPredicted RBP eCLIP28.49■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 FBLN2P98095 1184 aa28.48■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
COMMD3-BMI1-204ENST00000489125 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
COMMD3-BMI1-204ENST00000489125 ABCA5Q8WWZ7 1642 aa28.42■■■□□ 2.14
COMMD3-BMI1-204ENST00000489125 PBRM1Q86U86 1689 aa28.4■■■□□ 2.14
COMMD3-BMI1-204ENST00000489125 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
COMMD3-BMI1-204ENST00000489125 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
COMMD3-BMI1-204ENST00000489125 SYNJ1O43426 1573 aa28.39■■■□□ 2.14
COMMD3-BMI1-204ENST00000489125 CLASP1Q7Z460 1538 aa28.29■■■□□ 2.12
COMMD3-BMI1-204ENST00000489125 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
COMMD3-BMI1-204ENST00000489125 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
COMMD3-BMI1-204ENST00000489125 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
COMMD3-BMI1-204ENST00000489125 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
COMMD3-BMI1-204ENST00000489125 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
COMMD3-BMI1-204ENST00000489125 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.1
COMMD3-BMI1-204ENST00000489125 NUP160Q12769 1436 aa28.07■■■□□ 2.08
COMMD3-BMI1-204ENST00000489125 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
COMMD3-BMI1-204ENST00000489125 KIF27Q86VH2 1401 aa27.95■■■□□ 2.07
COMMD3-BMI1-204ENST00000489125 SHROOM2Q13796 1616 aa27.9■■■□□ 2.06
COMMD3-BMI1-204ENST00000489125 IGF1RP08069 1367 aa27.87■■■□□ 2.05
COMMD3-BMI1-204ENST00000489125 CUL7Q14999 1698 aa27.84■■■□□ 2.05
COMMD3-BMI1-204ENST00000489125 ERCC6L2Q5T890 1561 aa27.78■■■□□ 2.04
COMMD3-BMI1-204ENST00000489125 JPH4Q96JJ6 628 aa27.76■■■□□ 2.03
COMMD3-BMI1-204ENST00000489125 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms