RNA–Protein interactions for RNA: ENST00000602390.5

COMMD3-BMI1-205, Transcript of COMMD3-BMI1 readthrough, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COMMD3-BMI1, Length 1,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-205ENST00000602390 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
COMMD3-BMI1-205ENST00000602390 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
COMMD3-BMI1-205ENST00000602390 NISCHQ9Y2I1 1504 aa19.02■□□□□ 0.63
COMMD3-BMI1-205ENST00000602390 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
COMMD3-BMI1-205ENST00000602390 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
COMMD3-BMI1-205ENST00000602390 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
COMMD3-BMI1-205ENST00000602390 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
COMMD3-BMI1-205ENST00000602390 FOXD1Q16676 465 aa16.11■□□□□ 0.17
COMMD3-BMI1-205ENST00000602390 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
COMMD3-BMI1-205ENST00000602390 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
COMMD3-BMI1-205ENST00000602390 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
COMMD3-BMI1-205ENST00000602390 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
COMMD3-BMI1-205ENST00000602390 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
COMMD3-BMI1-205ENST00000602390 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
COMMD3-BMI1-205ENST00000602390 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
COMMD3-BMI1-205ENST00000602390 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
COMMD3-BMI1-205ENST00000602390 ADRA2BP18089 450 aa15.29■□□□□ 0.04
COMMD3-BMI1-205ENST00000602390 ABCC9O60706 1549 aa15.28■□□□□ 0.04
COMMD3-BMI1-205ENST00000602390 HRCP23327 699 aa15.17■□□□□ 0.02
COMMD3-BMI1-205ENST00000602390 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
COMMD3-BMI1-205ENST00000602390 SCRIBQ14160 1630 aa15.03■□□□□ -0
COMMD3-BMI1-205ENST00000602390 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
COMMD3-BMI1-205ENST00000602390 NACADO15069 1562 aa14.99□□□□□ -0.01
COMMD3-BMI1-205ENST00000602390 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
COMMD3-BMI1-205ENST00000602390 MSH5O43196 834 aa14.98□□□□□ -0.01
COMMD3-BMI1-205ENST00000602390 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
COMMD3-BMI1-205ENST00000602390 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
COMMD3-BMI1-205ENST00000602390 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
COMMD3-BMI1-205ENST00000602390 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
COMMD3-BMI1-205ENST00000602390 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
COMMD3-BMI1-205ENST00000602390 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
COMMD3-BMI1-205ENST00000602390 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
COMMD3-BMI1-205ENST00000602390 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
COMMD3-BMI1-205ENST00000602390 WIZO95785 1651 aa14.62□□□□□ -0.07
COMMD3-BMI1-205ENST00000602390 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
COMMD3-BMI1-205ENST00000602390 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
COMMD3-BMI1-205ENST00000602390 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
COMMD3-BMI1-205ENST00000602390 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
COMMD3-BMI1-205ENST00000602390 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
COMMD3-BMI1-205ENST00000602390 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
COMMD3-BMI1-205ENST00000602390 UNC13AQ9UPW8 1703 aa14.39□□□□□ -0.11
COMMD3-BMI1-205ENST00000602390 EEA1Q15075 1411 aa14.37□□□□□ -0.11
COMMD3-BMI1-205ENST00000602390 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
COMMD3-BMI1-205ENST00000602390 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
COMMD3-BMI1-205ENST00000602390 PEG3Q9GZU2 1588 aa14.29□□□□□ -0.12
COMMD3-BMI1-205ENST00000602390 ABCC8Q09428 1581 aa14.27□□□□□ -0.13
COMMD3-BMI1-205ENST00000602390 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
COMMD3-BMI1-205ENST00000602390 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
COMMD3-BMI1-205ENST00000602390 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
COMMD3-BMI1-205ENST00000602390 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
COMMD3-BMI1-205ENST00000602390 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
COMMD3-BMI1-205ENST00000602390 SOGA1O94964 1423 aa14.14□□□□□ -0.15
COMMD3-BMI1-205ENST00000602390 KIF21BO75037 1637 aa14.13□□□□□ -0.15
COMMD3-BMI1-205ENST00000602390 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
COMMD3-BMI1-205ENST00000602390 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
COMMD3-BMI1-205ENST00000602390 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
COMMD3-BMI1-205ENST00000602390 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
COMMD3-BMI1-205ENST00000602390 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
COMMD3-BMI1-205ENST00000602390 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
COMMD3-BMI1-205ENST00000602390 SYNJ1O43426 1573 aa14.03□□□□□ -0.16
COMMD3-BMI1-205ENST00000602390 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
COMMD3-BMI1-205ENST00000602390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.16
COMMD3-BMI1-205ENST00000602390 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
COMMD3-BMI1-205ENST00000602390 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
COMMD3-BMI1-205ENST00000602390 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 CLIP1P30622 1438 aa13.93□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
COMMD3-BMI1-205ENST00000602390 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
COMMD3-BMI1-205ENST00000602390 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
COMMD3-BMI1-205ENST00000602390 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
COMMD3-BMI1-205ENST00000602390 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
COMMD3-BMI1-205ENST00000602390 RAPGEF2Q9Y4G8 1499 aa13.84□□□□□ -0.19
COMMD3-BMI1-205ENST00000602390 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
COMMD3-BMI1-205ENST00000602390 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
COMMD3-BMI1-205ENST00000602390 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
COMMD3-BMI1-205ENST00000602390 APLP2Q06481 763 aa13.8□□□□□ -0.2
COMMD3-BMI1-205ENST00000602390 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
COMMD3-BMI1-205ENST00000602390 TTBK1Q5TCY1 1321 aaPredicted RBP13.78□□□□□ -0.2
COMMD3-BMI1-205ENST00000602390 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.21
COMMD3-BMI1-205ENST00000602390 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
COMMD3-BMI1-205ENST00000602390 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
COMMD3-BMI1-205ENST00000602390 ARAP1Q96P48 1450 aa13.72□□□□□ -0.21
COMMD3-BMI1-205ENST00000602390 KIF27Q86VH2 1401 aa13.71□□□□□ -0.21
COMMD3-BMI1-205ENST00000602390 CUX1P39880 1505 aa13.71□□□□□ -0.21
COMMD3-BMI1-205ENST00000602390 CFTRP13569 1480 aa13.7□□□□□ -0.22
COMMD3-BMI1-205ENST00000602390 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
COMMD3-BMI1-205ENST00000602390 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
COMMD3-BMI1-205ENST00000602390 CUX2O14529 1486 aa13.64□□□□□ -0.23
COMMD3-BMI1-205ENST00000602390 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
COMMD3-BMI1-205ENST00000602390 MAP3K1Q13233 1512 aa13.62□□□□□ -0.23
COMMD3-BMI1-205ENST00000602390 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
COMMD3-BMI1-205ENST00000602390 DHX57Q6P158 1386 aaKnown RBP13.59□□□□□ -0.23
COMMD3-BMI1-205ENST00000602390 ARHGAP35Q9NRY4 1499 aa13.57□□□□□ -0.24
COMMD3-BMI1-205ENST00000602390 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
COMMD3-BMI1-205ENST00000602390 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms