RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 AEBP2Q6ZN18 517 aaPredicted RBP34.52■■■■□ 3.12
COMMD3-BMI1-206ENST00000602395 CHIC1Q5VXU3 224 aa33.04■■■□□ 2.88
COMMD3-BMI1-206ENST00000602395 SENP3Q9H4L4 574 aaPredicted RBP29.36■■■□□ 2.29
COMMD3-BMI1-206ENST00000602395 PHF23Q9BUL5 403 aaPredicted RBP29.05■■■□□ 2.24
COMMD3-BMI1-206ENST00000602395 FOXD1Q16676 465 aa27.36■■□□□ 1.97
COMMD3-BMI1-206ENST00000602395 PLPPR3Q6T4P5 718 aa26.51■■□□□ 1.83
COMMD3-BMI1-206ENST00000602395 PPP6R1Q9UPN7 881 aa25.83■■□□□ 1.73
COMMD3-BMI1-206ENST00000602395 ADRA2BP18089 450 aa25.74■■□□□ 1.71
COMMD3-BMI1-206ENST00000602395 PIAS4Q8N2W9 510 aaPredicted RBP25.59■■□□□ 1.69
COMMD3-BMI1-206ENST00000602395 MSH5O43196 834 aa25.46■■□□□ 1.67
COMMD3-BMI1-206ENST00000602395 POTEDQ86YR6 584 aa24.39■■□□□ 1.49
COMMD3-BMI1-206ENST00000602395 MAPK8IP2Q13387 824 aaPredicted RBP23.57■■□□□ 1.36
COMMD3-BMI1-206ENST00000602395 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
COMMD3-BMI1-206ENST00000602395 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
COMMD3-BMI1-206ENST00000602395 PPP4R3CPQ6ZMV5 832 aa23.28■■□□□ 1.32
COMMD3-BMI1-206ENST00000602395 CNKSR2Q8WXI2 1034 aa22.78■■□□□ 1.24
COMMD3-BMI1-206ENST00000602395 HOXD11P31277 338 aaPredicted RBP22.61■■□□□ 1.21
COMMD3-BMI1-206ENST00000602395 RNF216Q9NWF9 866 aaPredicted RBP22.5■■□□□ 1.19
COMMD3-BMI1-206ENST00000602395 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
COMMD3-BMI1-206ENST00000602395 DCAF8L1A6NGE4 600 aa22.31■■□□□ 1.16
COMMD3-BMI1-206ENST00000602395 NPM3O75607 178 aaKnown RBP22.15■■□□□ 1.14
COMMD3-BMI1-206ENST00000602395 KCNA4P22459 653 aa21.98■■□□□ 1.11
COMMD3-BMI1-206ENST00000602395 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
COMMD3-BMI1-206ENST00000602395 RNF39Q9H2S5 420 aa21.78■■□□□ 1.08
COMMD3-BMI1-206ENST00000602395 CACNB1Q02641 598 aaPredicted RBP21.67■■□□□ 1.06
COMMD3-BMI1-206ENST00000602395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.5■■□□□ 1.03
COMMD3-BMI1-206ENST00000602395 C1QBPQ07021 282 aaKnown RBP21.47■■□□□ 1.03
COMMD3-BMI1-206ENST00000602395 SLC4A2P04920 1241 aa21.11■□□□□ 0.97
COMMD3-BMI1-206ENST00000602395 U3KPZ7 1027 aaPredicted RBP21.11■□□□□ 0.97
COMMD3-BMI1-206ENST00000602395 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
COMMD3-BMI1-206ENST00000602395 SPINK5Q9NQ38 1064 aaPredicted RBP20.71■□□□□ 0.91
COMMD3-BMI1-206ENST00000602395 CAPN15O75808 1086 aa20.63■□□□□ 0.89
COMMD3-BMI1-206ENST00000602395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
COMMD3-BMI1-206ENST00000602395 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.89
COMMD3-BMI1-206ENST00000602395 APLP2Q06481 763 aa20.5■□□□□ 0.87
COMMD3-BMI1-206ENST00000602395 DSG3P32926 999 aa20.49■□□□□ 0.87
COMMD3-BMI1-206ENST00000602395 SAMD1Q6SPF0 538 aaPredicted RBP20.49■□□□□ 0.87
COMMD3-BMI1-206ENST00000602395 MYCNP04198 464 aaPredicted RBP20.46■□□□□ 0.87
COMMD3-BMI1-206ENST00000602395 FOXD4L1Q9NU39 408 aa20.4■□□□□ 0.86
COMMD3-BMI1-206ENST00000602395 TRHP20396 242 aaPredicted RBP20.38■□□□□ 0.85
COMMD3-BMI1-206ENST00000602395 ZNF219Q9P2Y4 722 aaPredicted RBP20.35■□□□□ 0.85
COMMD3-BMI1-206ENST00000602395 ZBTB22O15209 634 aa20.23■□□□□ 0.83
COMMD3-BMI1-206ENST00000602395 ABCB7O75027 752 aa20.18■□□□□ 0.82
COMMD3-BMI1-206ENST00000602395 ATF5Q9Y2D1 282 aaPredicted RBP20.01■□□□□ 0.79
COMMD3-BMI1-206ENST00000602395 POLA2Q14181 598 aa19.92■□□□□ 0.78
COMMD3-BMI1-206ENST00000602395 ATXN8OSP0DMR3 200 aa19.78■□□□□ 0.76
COMMD3-BMI1-206ENST00000602395 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
COMMD3-BMI1-206ENST00000602395 ZBTB12Q9Y330 459 aaPredicted RBP19.51■□□□□ 0.71
COMMD3-BMI1-206ENST00000602395 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
COMMD3-BMI1-206ENST00000602395 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.69
COMMD3-BMI1-206ENST00000602395 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
COMMD3-BMI1-206ENST00000602395 POTEHQ6S545 545 aa19.16■□□□□ 0.66
COMMD3-BMI1-206ENST00000602395 FBLN2P98095 1184 aa19.15■□□□□ 0.66
COMMD3-BMI1-206ENST00000602395 AKT1S1Q96B36 256 aa19.15■□□□□ 0.66
COMMD3-BMI1-206ENST00000602395 MKRN4PQ13434 485 aaPredicted RBP19.1■□□□□ 0.65
COMMD3-BMI1-206ENST00000602395 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
COMMD3-BMI1-206ENST00000602395 REM2Q8IYK8 340 aaPredicted RBP18.98■□□□□ 0.63
COMMD3-BMI1-206ENST00000602395 SPDYE2BA6NHP3 402 aa18.95■□□□□ 0.62
COMMD3-BMI1-206ENST00000602395 SPDYE6P0CI01 402 aa18.95■□□□□ 0.62
COMMD3-BMI1-206ENST00000602395 SPDYE2Q495Y8 402 aa18.95■□□□□ 0.62
COMMD3-BMI1-206ENST00000602395 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
COMMD3-BMI1-206ENST00000602395 PITPNM1O00562 1244 aa18.75■□□□□ 0.59
COMMD3-BMI1-206ENST00000602395 SSUH2Q9Y2M2 353 aa18.75■□□□□ 0.59
COMMD3-BMI1-206ENST00000602395 PIP4P2Q8N4L2 257 aa18.61■□□□□ 0.57
COMMD3-BMI1-206ENST00000602395 FXR2P51116 673 aaKnown RBP eCLIP18.56■□□□□ 0.56
COMMD3-BMI1-206ENST00000602395 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
COMMD3-BMI1-206ENST00000602395 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
COMMD3-BMI1-206ENST00000602395 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
COMMD3-BMI1-206ENST00000602395 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
COMMD3-BMI1-206ENST00000602395 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
COMMD3-BMI1-206ENST00000602395 PRR29P0C7W0 189 aa18.24■□□□□ 0.51
COMMD3-BMI1-206ENST00000602395 HAX1O00165 279 aa18.18■□□□□ 0.5
COMMD3-BMI1-206ENST00000602395 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
COMMD3-BMI1-206ENST00000602395 SP7Q8TDD2 431 aaPredicted RBP18.09■□□□□ 0.49
COMMD3-BMI1-206ENST00000602395 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
COMMD3-BMI1-206ENST00000602395 EVX2Q03828 476 aa18.02■□□□□ 0.48
COMMD3-BMI1-206ENST00000602395 PROM2Q8N271 834 aa17.96■□□□□ 0.47
COMMD3-BMI1-206ENST00000602395 C19orf67A6NJJ6 358 aa17.95■□□□□ 0.46
COMMD3-BMI1-206ENST00000602395 FARP1Q9Y4F1 1045 aaPredicted RBP17.9■□□□□ 0.46
COMMD3-BMI1-206ENST00000602395 CREBZFQ9NS37 354 aa17.88■□□□□ 0.45
COMMD3-BMI1-206ENST00000602395 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
COMMD3-BMI1-206ENST00000602395 FKBP8Q14318 412 aa17.67■□□□□ 0.42
COMMD3-BMI1-206ENST00000602395 MNX1P50219 401 aaPredicted RBP17.63■□□□□ 0.41
COMMD3-BMI1-206ENST00000602395 GABBR2O75899 941 aa17.61■□□□□ 0.41
COMMD3-BMI1-206ENST00000602395 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
COMMD3-BMI1-206ENST00000602395 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
COMMD3-BMI1-206ENST00000602395 ZNF579Q8NAF0 562 aaKnown RBP17.45■□□□□ 0.38
COMMD3-BMI1-206ENST00000602395 MIER1Q8N108 512 aa17.44■□□□□ 0.38
COMMD3-BMI1-206ENST00000602395 CLCN6P51797 869 aa17.43■□□□□ 0.38
COMMD3-BMI1-206ENST00000602395 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
COMMD3-BMI1-206ENST00000602395 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
COMMD3-BMI1-206ENST00000602395 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
COMMD3-BMI1-206ENST00000602395 PHF12Q96QT6 1004 aa17.27■□□□□ 0.36
COMMD3-BMI1-206ENST00000602395 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
COMMD3-BMI1-206ENST00000602395 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
COMMD3-BMI1-206ENST00000602395 GALR2O43603 387 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-BMI1-206ENST00000602395 TSPYL2Q9H2G4 693 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-BMI1-206ENST00000602395 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
COMMD3-BMI1-206ENST00000602395 DCBLD2Q96PD2 775 aa17.16■□□□□ 0.34
COMMD3-BMI1-206ENST00000602395 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms