RNA–Protein interactions for RNA: ENST00000463409.6

COMMD3-BMI1-202, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 3

Gene COMMD3-BMI1, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-202ENST00000463409 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
COMMD3-BMI1-202ENST00000463409 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
COMMD3-BMI1-202ENST00000463409 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
COMMD3-BMI1-202ENST00000463409 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
COMMD3-BMI1-202ENST00000463409 FOXD1Q16676 465 aa17.87■□□□□ 0.45
COMMD3-BMI1-202ENST00000463409 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
COMMD3-BMI1-202ENST00000463409 MSH5O43196 834 aa16.89■□□□□ 0.29
COMMD3-BMI1-202ENST00000463409 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
COMMD3-BMI1-202ENST00000463409 PIAS4Q8N2W9 510 aaPredicted RBP16.57■□□□□ 0.24
COMMD3-BMI1-202ENST00000463409 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
COMMD3-BMI1-202ENST00000463409 ADRA2BP18089 450 aa16.33■□□□□ 0.2
COMMD3-BMI1-202ENST00000463409 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
COMMD3-BMI1-202ENST00000463409 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
COMMD3-BMI1-202ENST00000463409 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
COMMD3-BMI1-202ENST00000463409 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
COMMD3-BMI1-202ENST00000463409 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
COMMD3-BMI1-202ENST00000463409 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
COMMD3-BMI1-202ENST00000463409 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
COMMD3-BMI1-202ENST00000463409 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
COMMD3-BMI1-202ENST00000463409 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
COMMD3-BMI1-202ENST00000463409 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
COMMD3-BMI1-202ENST00000463409 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
COMMD3-BMI1-202ENST00000463409 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
COMMD3-BMI1-202ENST00000463409 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
COMMD3-BMI1-202ENST00000463409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
COMMD3-BMI1-202ENST00000463409 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
COMMD3-BMI1-202ENST00000463409 KCNA4P22459 653 aa13.45□□□□□ -0.26
COMMD3-BMI1-202ENST00000463409 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
COMMD3-BMI1-202ENST00000463409 DSG3P32926 999 aa13.34□□□□□ -0.27
COMMD3-BMI1-202ENST00000463409 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-BMI1-202ENST00000463409 CAPN15O75808 1086 aa13.24□□□□□ -0.29
COMMD3-BMI1-202ENST00000463409 POTEHQ6S545 545 aa13.24□□□□□ -0.29
COMMD3-BMI1-202ENST00000463409 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
COMMD3-BMI1-202ENST00000463409 APLP2Q06481 763 aa13.05□□□□□ -0.32
COMMD3-BMI1-202ENST00000463409 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-BMI1-202ENST00000463409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
COMMD3-BMI1-202ENST00000463409 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
COMMD3-BMI1-202ENST00000463409 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
COMMD3-BMI1-202ENST00000463409 ABCB7O75027 752 aa12.88□□□□□ -0.35
COMMD3-BMI1-202ENST00000463409 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
COMMD3-BMI1-202ENST00000463409 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
COMMD3-BMI1-202ENST00000463409 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
COMMD3-BMI1-202ENST00000463409 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-BMI1-202ENST00000463409 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
COMMD3-BMI1-202ENST00000463409 POLA2Q14181 598 aa12.57□□□□□ -0.4
COMMD3-BMI1-202ENST00000463409 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
COMMD3-BMI1-202ENST00000463409 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
COMMD3-BMI1-202ENST00000463409 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
COMMD3-BMI1-202ENST00000463409 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
COMMD3-BMI1-202ENST00000463409 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-BMI1-202ENST00000463409 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
COMMD3-BMI1-202ENST00000463409 ZBTB22O15209 634 aa12.31□□□□□ -0.44
COMMD3-BMI1-202ENST00000463409 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
COMMD3-BMI1-202ENST00000463409 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
COMMD3-BMI1-202ENST00000463409 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
COMMD3-BMI1-202ENST00000463409 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
COMMD3-BMI1-202ENST00000463409 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
COMMD3-BMI1-202ENST00000463409 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
COMMD3-BMI1-202ENST00000463409 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
COMMD3-BMI1-202ENST00000463409 HAX1O00165 279 aa11.99□□□□□ -0.49
COMMD3-BMI1-202ENST00000463409 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
COMMD3-BMI1-202ENST00000463409 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
COMMD3-BMI1-202ENST00000463409 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
COMMD3-BMI1-202ENST00000463409 FBLN2P98095 1184 aa11.86□□□□□ -0.51
COMMD3-BMI1-202ENST00000463409 EVX2Q03828 476 aa11.86□□□□□ -0.51
COMMD3-BMI1-202ENST00000463409 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
COMMD3-BMI1-202ENST00000463409 SSUH2Q9Y2M2 353 aa11.79□□□□□ -0.52
COMMD3-BMI1-202ENST00000463409 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
COMMD3-BMI1-202ENST00000463409 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
COMMD3-BMI1-202ENST00000463409 C19orf67A6NJJ6 358 aa11.74□□□□□ -0.53
COMMD3-BMI1-202ENST00000463409 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
COMMD3-BMI1-202ENST00000463409 CLEC11AQ9Y240 323 aa11.68□□□□□ -0.54
COMMD3-BMI1-202ENST00000463409 GABBR2O75899 941 aa11.6□□□□□ -0.55
COMMD3-BMI1-202ENST00000463409 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
COMMD3-BMI1-202ENST00000463409 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
COMMD3-BMI1-202ENST00000463409 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
COMMD3-BMI1-202ENST00000463409 LHX8Q68G74 356 aa11.48□□□□□ -0.57
COMMD3-BMI1-202ENST00000463409 CLCN6P51797 869 aa11.43□□□□□ -0.58
COMMD3-BMI1-202ENST00000463409 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
COMMD3-BMI1-202ENST00000463409 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
COMMD3-BMI1-202ENST00000463409 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
COMMD3-BMI1-202ENST00000463409 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
COMMD3-BMI1-202ENST00000463409 FKBP8Q14318 412 aa11.24□□□□□ -0.61
COMMD3-BMI1-202ENST00000463409 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
COMMD3-BMI1-202ENST00000463409 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
COMMD3-BMI1-202ENST00000463409 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
COMMD3-BMI1-202ENST00000463409 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
COMMD3-BMI1-202ENST00000463409 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
COMMD3-BMI1-202ENST00000463409 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
COMMD3-BMI1-202ENST00000463409 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
COMMD3-BMI1-202ENST00000463409 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
COMMD3-BMI1-202ENST00000463409 OTUD5Q96G74 571 aa11□□□□□ -0.65
COMMD3-BMI1-202ENST00000463409 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
COMMD3-BMI1-202ENST00000463409 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
COMMD3-BMI1-202ENST00000463409 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
COMMD3-BMI1-202ENST00000463409 PHF12Q96QT6 1004 aa10.95□□□□□ -0.66
COMMD3-BMI1-202ENST00000463409 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
COMMD3-BMI1-202ENST00000463409 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
COMMD3-BMI1-202ENST00000463409 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
COMMD3-BMI1-202ENST00000463409 PROM2Q8N271 834 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms