RNA–Protein interactions for RNA: ENST00000406386.7

TRIOBP-204, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIOBP, Length 10,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-204ENST00000406386 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
TRIOBP-204ENST00000406386 DCAF8L2P0C7V8 631 aa18.33■□□□□ 0.53
TRIOBP-204ENST00000406386 MYT1Q01538 1121 aa17.93■□□□□ 0.46
TRIOBP-204ENST00000406386 ERICH6Q7L0X2 663 aa17.9■□□□□ 0.46
TRIOBP-204ENST00000406386 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
TRIOBP-204ENST00000406386 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
TRIOBP-204ENST00000406386 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
TRIOBP-204ENST00000406386 APLP2Q06481 763 aa17.55■□□□□ 0.4
TRIOBP-204ENST00000406386 NEFLP07196 543 aa17.32■□□□□ 0.36
TRIOBP-204ENST00000406386 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
TRIOBP-204ENST00000406386 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
TRIOBP-204ENST00000406386 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
TRIOBP-204ENST00000406386 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
TRIOBP-204ENST00000406386 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
TRIOBP-204ENST00000406386 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
TRIOBP-204ENST00000406386 SHROOM4Q9ULL8 1493 aa17.07■□□□□ 0.32
TRIOBP-204ENST00000406386 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.31
TRIOBP-204ENST00000406386 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
TRIOBP-204ENST00000406386 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
TRIOBP-204ENST00000406386 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
TRIOBP-204ENST00000406386 ATP1B4Q9UN42 357 aaPredicted RBP16.5■□□□□ 0.23
TRIOBP-204ENST00000406386 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
TRIOBP-204ENST00000406386 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
TRIOBP-204ENST00000406386 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
TRIOBP-204ENST00000406386 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
TRIOBP-204ENST00000406386 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
TRIOBP-204ENST00000406386 HRCP23327 699 aa16.18■□□□□ 0.18
TRIOBP-204ENST00000406386 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
TRIOBP-204ENST00000406386 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.16
TRIOBP-204ENST00000406386 ZBTB47Q9UFB7 747 aaPredicted RBP16.04■□□□□ 0.16
TRIOBP-204ENST00000406386 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
TRIOBP-204ENST00000406386 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
TRIOBP-204ENST00000406386 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.14
TRIOBP-204ENST00000406386 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
TRIOBP-204ENST00000406386 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
TRIOBP-204ENST00000406386 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
TRIOBP-204ENST00000406386 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
TRIOBP-204ENST00000406386 ITGAEP38570 1179 aa15.91■□□□□ 0.14
TRIOBP-204ENST00000406386 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
TRIOBP-204ENST00000406386 EIF5BO60841 1220 aaKnown RBP15.87■□□□□ 0.13
TRIOBP-204ENST00000406386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
TRIOBP-204ENST00000406386 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
TRIOBP-204ENST00000406386 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
TRIOBP-204ENST00000406386 BCANQ96GW7 911 aa15.76■□□□□ 0.11
TRIOBP-204ENST00000406386 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
TRIOBP-204ENST00000406386 ANP32CO43423 234 aa15.7■□□□□ 0.1
TRIOBP-204ENST00000406386 GTF3C3Q9Y5Q9 886 aa15.7■□□□□ 0.1
TRIOBP-204ENST00000406386 HSP90AA1P07900 732 aaKnown RBP15.67■□□□□ 0.1
TRIOBP-204ENST00000406386 NEFMP07197 916 aa15.61■□□□□ 0.09
TRIOBP-204ENST00000406386 UPF2Q9HAU5 1272 aaKnown RBP15.58■□□□□ 0.09
TRIOBP-204ENST00000406386 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
TRIOBP-204ENST00000406386 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
TRIOBP-204ENST00000406386 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
TRIOBP-204ENST00000406386 FAM50AQ14320 339 aaKnown RBP15.5■□□□□ 0.07
TRIOBP-204ENST00000406386 TNNT2P45379 298 aaPredicted RBP15.5■□□□□ 0.07
TRIOBP-204ENST00000406386 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
TRIOBP-204ENST00000406386 CDK11BP21127 795 aaKnown RBP15.47■□□□□ 0.07
TRIOBP-204ENST00000406386 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
TRIOBP-204ENST00000406386 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
TRIOBP-204ENST00000406386 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
TRIOBP-204ENST00000406386 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
TRIOBP-204ENST00000406386 NBR1Q14596 966 aa15.32■□□□□ 0.04
TRIOBP-204ENST00000406386 ARXQ96QS3 562 aa15.27■□□□□ 0.04
TRIOBP-204ENST00000406386 ANP32EQ9BTT0 268 aa15.27■□□□□ 0.03
TRIOBP-204ENST00000406386 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
TRIOBP-204ENST00000406386 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
TRIOBP-204ENST00000406386 FKBP8Q14318 412 aa15.19■□□□□ 0.02
TRIOBP-204ENST00000406386 BECN1Q14457 450 aa15.18■□□□□ 0.02
TRIOBP-204ENST00000406386 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
TRIOBP-204ENST00000406386 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
TRIOBP-204ENST00000406386 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
TRIOBP-204ENST00000406386 GOLGA6L22H0YM25 854 aa15.16■□□□□ 0.02
TRIOBP-204ENST00000406386 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
TRIOBP-204ENST00000406386 DDRGK1Q96HY6 314 aa15.14■□□□□ 0.01
TRIOBP-204ENST00000406386 PTMAP06454 111 aaKnown RBP15.12■□□□□ 0.01
TRIOBP-204ENST00000406386 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
TRIOBP-204ENST00000406386 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
TRIOBP-204ENST00000406386 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
TRIOBP-204ENST00000406386 TONSLQ96HA7 1378 aa15.06■□□□□ 0
TRIOBP-204ENST00000406386 DNTTIP2Q5QJE6 756 aaKnown RBP15.05■□□□□ -0
TRIOBP-204ENST00000406386 NAP1L5Q96NT1 182 aaPredicted RBP15.02■□□□□ -0
TRIOBP-204ENST00000406386 GOLGA6L6A8MZA4 724 aa15.02■□□□□ -0
TRIOBP-204ENST00000406386 NRDCO43847 1150 aa14.96□□□□□ -0.01
TRIOBP-204ENST00000406386 CHAF1AQ13111 956 aaPredicted RBP14.96□□□□□ -0.02
TRIOBP-204ENST00000406386 CASC1Q6TDU7 716 aa14.95□□□□□ -0.02
TRIOBP-204ENST00000406386 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
TRIOBP-204ENST00000406386 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIOBP-204ENST00000406386 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
TRIOBP-204ENST00000406386 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
TRIOBP-204ENST00000406386 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
TRIOBP-204ENST00000406386 PPM1GO15355 546 aaPredicted RBP14.86□□□□□ -0.03
TRIOBP-204ENST00000406386 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
TRIOBP-204ENST00000406386 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
TRIOBP-204ENST00000406386 L1TD1Q5T7N2 865 aaKnown RBP14.83□□□□□ -0.03
TRIOBP-204ENST00000406386 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
TRIOBP-204ENST00000406386 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
TRIOBP-204ENST00000406386 DDX10Q13206 875 aaKnown RBP14.78□□□□□ -0.04
TRIOBP-204ENST00000406386 ZNF777Q9ULD5 760 aaPredicted RBP14.76□□□□□ -0.05
TRIOBP-204ENST00000406386 FBLN2P98095 1184 aa14.75□□□□□ -0.05
TRIOBP-204ENST00000406386 MSNP26038 577 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms