RNA–Protein interactions for RNA: ENST00000475460.6

COMMD3-BMI1-203, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-203ENST00000475460 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
COMMD3-BMI1-203ENST00000475460 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
COMMD3-BMI1-203ENST00000475460 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
COMMD3-BMI1-203ENST00000475460 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
COMMD3-BMI1-203ENST00000475460 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
COMMD3-BMI1-203ENST00000475460 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
COMMD3-BMI1-203ENST00000475460 FOXD1Q16676 465 aa18.52■□□□□ 0.56
COMMD3-BMI1-203ENST00000475460 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
COMMD3-BMI1-203ENST00000475460 ADRA2BP18089 450 aa18.02■□□□□ 0.48
COMMD3-BMI1-203ENST00000475460 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
COMMD3-BMI1-203ENST00000475460 MSH5O43196 834 aa17.15■□□□□ 0.34
COMMD3-BMI1-203ENST00000475460 ABCC9O60706 1549 aa17.01■□□□□ 0.31
COMMD3-BMI1-203ENST00000475460 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
COMMD3-BMI1-203ENST00000475460 KCNA4P22459 653 aa16.75■□□□□ 0.27
COMMD3-BMI1-203ENST00000475460 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
COMMD3-BMI1-203ENST00000475460 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
COMMD3-BMI1-203ENST00000475460 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
COMMD3-BMI1-203ENST00000475460 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-BMI1-203ENST00000475460 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
COMMD3-BMI1-203ENST00000475460 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
COMMD3-BMI1-203ENST00000475460 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
COMMD3-BMI1-203ENST00000475460 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
COMMD3-BMI1-203ENST00000475460 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
COMMD3-BMI1-203ENST00000475460 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
COMMD3-BMI1-203ENST00000475460 NACADO15069 1562 aa15.93■□□□□ 0.14
COMMD3-BMI1-203ENST00000475460 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
COMMD3-BMI1-203ENST00000475460 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
COMMD3-BMI1-203ENST00000475460 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
COMMD3-BMI1-203ENST00000475460 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
COMMD3-BMI1-203ENST00000475460 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
COMMD3-BMI1-203ENST00000475460 MYO15BQ96JP2 1530 aa15.66■□□□□ 0.1
COMMD3-BMI1-203ENST00000475460 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
COMMD3-BMI1-203ENST00000475460 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
COMMD3-BMI1-203ENST00000475460 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
COMMD3-BMI1-203ENST00000475460 ZBTB22O15209 634 aa15.49■□□□□ 0.07
COMMD3-BMI1-203ENST00000475460 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
COMMD3-BMI1-203ENST00000475460 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
COMMD3-BMI1-203ENST00000475460 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
COMMD3-BMI1-203ENST00000475460 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
COMMD3-BMI1-203ENST00000475460 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
COMMD3-BMI1-203ENST00000475460 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
COMMD3-BMI1-203ENST00000475460 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
COMMD3-BMI1-203ENST00000475460 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
COMMD3-BMI1-203ENST00000475460 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
COMMD3-BMI1-203ENST00000475460 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
COMMD3-BMI1-203ENST00000475460 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
COMMD3-BMI1-203ENST00000475460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
COMMD3-BMI1-203ENST00000475460 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
COMMD3-BMI1-203ENST00000475460 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
COMMD3-BMI1-203ENST00000475460 U3KPZ7 1027 aaPredicted RBP14.79□□□□□ -0.04
COMMD3-BMI1-203ENST00000475460 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
COMMD3-BMI1-203ENST00000475460 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
COMMD3-BMI1-203ENST00000475460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
COMMD3-BMI1-203ENST00000475460 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
COMMD3-BMI1-203ENST00000475460 CUX2O14529 1486 aa14.69□□□□□ -0.06
COMMD3-BMI1-203ENST00000475460 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
COMMD3-BMI1-203ENST00000475460 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
COMMD3-BMI1-203ENST00000475460 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
COMMD3-BMI1-203ENST00000475460 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
COMMD3-BMI1-203ENST00000475460 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
COMMD3-BMI1-203ENST00000475460 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
COMMD3-BMI1-203ENST00000475460 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
COMMD3-BMI1-203ENST00000475460 SMARCA4P51532 1647 aa14.56□□□□□ -0.08
COMMD3-BMI1-203ENST00000475460 APLP2Q06481 763 aa14.56□□□□□ -0.08
COMMD3-BMI1-203ENST00000475460 NESP48681 1621 aa14.55□□□□□ -0.08
COMMD3-BMI1-203ENST00000475460 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
COMMD3-BMI1-203ENST00000475460 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
COMMD3-BMI1-203ENST00000475460 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
COMMD3-BMI1-203ENST00000475460 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
COMMD3-BMI1-203ENST00000475460 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
COMMD3-BMI1-203ENST00000475460 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
COMMD3-BMI1-203ENST00000475460 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
COMMD3-BMI1-203ENST00000475460 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
COMMD3-BMI1-203ENST00000475460 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
COMMD3-BMI1-203ENST00000475460 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
COMMD3-BMI1-203ENST00000475460 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
COMMD3-BMI1-203ENST00000475460 CAPN15O75808 1086 aa14.27□□□□□ -0.13
COMMD3-BMI1-203ENST00000475460 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
COMMD3-BMI1-203ENST00000475460 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
COMMD3-BMI1-203ENST00000475460 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
COMMD3-BMI1-203ENST00000475460 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-BMI1-203ENST00000475460 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-BMI1-203ENST00000475460 WIZO95785 1651 aa14.17□□□□□ -0.14
COMMD3-BMI1-203ENST00000475460 WDR62O43379 1518 aa14.17□□□□□ -0.14
COMMD3-BMI1-203ENST00000475460 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
COMMD3-BMI1-203ENST00000475460 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
COMMD3-BMI1-203ENST00000475460 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
COMMD3-BMI1-203ENST00000475460 CFTRP13569 1480 aa14.1□□□□□ -0.15
COMMD3-BMI1-203ENST00000475460 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
COMMD3-BMI1-203ENST00000475460 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 POLA2Q14181 598 aa14.01□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 FKBP8Q14318 412 aa13.99□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 ABCB7O75027 752 aa13.97□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 DSG3P32926 999 aa13.96□□□□□ -0.17
COMMD3-BMI1-203ENST00000475460 CCDC88BA6NC98 1476 aa13.9□□□□□ -0.18
COMMD3-BMI1-203ENST00000475460 IFT140Q96RY7 1462 aa13.89□□□□□ -0.19
COMMD3-BMI1-203ENST00000475460 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
COMMD3-BMI1-203ENST00000475460 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms