Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.391e-9■□□□□ 11
PRPF8Q6P2Q9 AKR1C1-205ENST00000477661 2637 ntTSL 55.77□□□□□ -1.491e-9■□□□□ 11
PRPF8Q6P2Q9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.63□□□□□ -2.151e-9■□□□□ 11
PRPF8Q6P2Q9 PRSS53-203ENST00000492427 1782 ntTSL 315.65■□□□□ 0.12e-8■□□□□ 11
PRPF8Q6P2Q9 YWHAE-213ENST00000576854 1374 nt19.66■□□□□ 0.744e-7■□□□□ 11
PRPF8Q6P2Q9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.285e-9■□□□□ 11
PRPF8Q6P2Q9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.26■□□□□ 0.034e-7■□□□□ 11
PRPF8Q6P2Q9 B4GALT2-208ENST00000498543 360 ntTSL 315.2■□□□□ 0.024e-7■□□□□ 11
PRPF8Q6P2Q9 LATS1-205ENST00000542720 1096 ntTSL 1 (best)14.68□□□□□ -0.066e-10■□□□□ 11
PRPF8Q6P2Q9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.245e-9■□□□□ 11
PRPF8Q6P2Q9 UBB-206ENST00000577958 376 ntTSL 213.32□□□□□ -0.285e-9■□□□□ 11
PRPF8Q6P2Q9 LATS1-204ENST00000458696 602 ntTSL 313.14□□□□□ -0.316e-10■□□□□ 11
PRPF8Q6P2Q9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.65□□□□□ -0.386e-10■□□□□ 11
PRPF8Q6P2Q9 RNF7-207ENST00000498828 652 ntTSL 211.67□□□□□ -0.542e-16■□□□□ 11
PRPF8Q6P2Q9 CSNK1D-218ENST00000581655 549 ntTSL 411.55□□□□□ -0.564e-7■□□□□ 11
PRPF8Q6P2Q9 ACTN4-205ENST00000477174 544 ntTSL 311.34□□□□□ -0.594e-7■□□□□ 11
PRPF8Q6P2Q9 UBB-207ENST00000578649 477 ntTSL 510.97□□□□□ -0.655e-9■□□□□ 11
PRPF8Q6P2Q9 NARF-211ENST00000578820 625 ntTSL 39.69□□□□□ -0.863e-7■□□□□ 11
PRPF8Q6P2Q9 YWHAE-205ENST00000489287 465 ntTSL 29.39□□□□□ -0.914e-7■□□□□ 11
PRPF8Q6P2Q9 UBB-205ENST00000577640 724 ntTSL 59.15□□□□□ -0.955e-9■□□□□ 11
PRPF8Q6P2Q9 YWHAE-209ENST00000572108 258 ntTSL 39.05□□□□□ -0.964e-7■□□□□ 11
PRPF8Q6P2Q9 NUP205-205ENST00000472132 553 ntTSL 48.83□□□□□ -14e-7■□□□□ 11
PRPF8Q6P2Q9 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.065e-9■□□□□ 11
PRPF8Q6P2Q9 YWHAE-207ENST00000498643 312 ntTSL 38.36□□□□□ -1.074e-7■□□□□ 11
PRPF8Q6P2Q9 UBB-204ENST00000535788 704 ntTSL 2 BASIC7.89□□□□□ -1.155e-9■□□□□ 11
PRPF8Q6P2Q9 MIR6807-201ENST00000621968 92 ntBASIC7.54□□□□□ -1.24e-7■□□□□ 11
PRPF8Q6P2Q9 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC7.27□□□□□ -1.254e-7■□□□□ 11
PRPF8Q6P2Q9 RPL32-205ENST00000434963 439 ntTSL 57.19□□□□□ -1.262e-11■□□□□ 11
PRPF8Q6P2Q9 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC6.78□□□□□ -1.324e-7■□□□□ 11
PRPF8Q6P2Q9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.95□□□□□ -1.784e-7■□□□□ 11
PRPF8Q6P2Q9 NUP205-204ENST00000463247 570 ntTSL 43.37□□□□□ -1.874e-7■□□□□ 11
PRPF8Q6P2Q9 DENND5A-207ENST00000527896 604 ntTSL 33.03□□□□□ -1.924e-7■□□□□ 11
PRPF8Q6P2Q9 REXO1-203ENST00000586343 718 ntTSL 510.66□□□□□ -0.78e-7■□□□□ 11
PRPF8Q6P2Q9 QPRT-201ENST00000219771 913 ntTSL 215.6■□□□□ 0.093e-17■□□□□ 10.9
PRPF8Q6P2Q9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.223e-17■□□□□ 10.9
PRPF8Q6P2Q9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.53□□□□□ -0.243e-17■□□□□ 10.9
PRPF8Q6P2Q9 ANKRD9-203ENST00000559404 1502 ntTSL 220.82■□□□□ 0.924e-18■□□□□ 10.9
PRPF8Q6P2Q9 ANKRD9-202ENST00000557902 620 ntTSL 318.61■□□□□ 0.574e-18■□□□□ 10.9
PRPF8Q6P2Q9 CTAGE5-216ENST00000556990 568 ntTSL 412.31□□□□□ -0.441e-8■□□□□ 10.9
PRPF8Q6P2Q9 CTAGE5-213ENST00000555716 558 ntTSL 45.79□□□□□ -1.481e-8■□□□□ 10.9
PRPF8Q6P2Q9 CTAGE5-211ENST00000554392 527 ntTSL 41.88□□□□□ -2.111e-8■□□□□ 10.9
PRPF8Q6P2Q9 CBX4-204ENST00000495122 490 ntTSL 313.29□□□□□ -0.286e-14■□□□□ 10.9
PRPF8Q6P2Q9 AFMID-211ENST00000589664 754 ntTSL 59.25□□□□□ -0.934e-21■□□□□ 10.9
PRPF8Q6P2Q9 AFMID-206ENST00000587750 541 ntTSL 38.83□□□□□ -14e-21■□□□□ 10.9
PRPF8Q6P2Q9 AFMID-203ENST00000585419 493 ntTSL 38.23□□□□□ -1.094e-21■□□□□ 10.9
PRPF8Q6P2Q9 ARFRP1-206ENST00000610774 5178 ntTSL 211.66□□□□□ -0.541e-17■□□□□ 10.9
PRPF8Q6P2Q9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.4■□□□□ 0.77e-7■□□□□ 10.9
PRPF8Q6P2Q9 ERRFI1-205ENST00000487559 787 ntTSL 219.4■□□□□ 0.77e-7■□□□□ 10.9
PRPF8Q6P2Q9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.23■□□□□ 0.677e-7■□□□□ 10.9
PRPF8Q6P2Q9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.527e-7■□□□□ 10.9
PRPF8Q6P2Q9 RTKN-205ENST00000464094 1266 ntTSL 1 (best)19.01■□□□□ 0.631e-26■□□□□ 10.9
PRPF8Q6P2Q9 RTKN-204ENST00000460968 842 ntTSL 211.47□□□□□ -0.571e-26■□□□□ 10.9
PRPF8Q6P2Q9 UNC13D-211ENST00000588774 938 ntTSL 318.81■□□□□ 0.62e-9■□□□□ 10.9
PRPF8Q6P2Q9 SRC-207ENST00000477066 3300 ntTSL 29.17□□□□□ -0.945e-8■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-206ENST00000519321 692 ntTSL 318.86■□□□□ 0.613e-6■□□□□ 10.9
PRPF8Q6P2Q9 AIFM3-212ENST00000472575 556 ntTSL 418.4■□□□□ 0.549e-12■□□□□ 10.9
PRPF8Q6P2Q9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.451e-9■□□□□ 10.9
PRPF8Q6P2Q9 AIFM3-215ENST00000484206 592 ntTSL 417.34■□□□□ 0.379e-12■□□□□ 10.9
PRPF8Q6P2Q9 RNF44-203ENST00000504434 785 ntTSL 216.86■□□□□ 0.297e-19■□□□□ 10.9
PRPF8Q6P2Q9 AIFM3-210ENST00000467926 546 ntTSL 415.84■□□□□ 0.139e-12■□□□□ 10.9
PRPF8Q6P2Q9 ANXA6-205ENST00000517707 603 ntTSL 29.15□□□□□ -0.955e-9■□□□□ 10.9
PRPF8Q6P2Q9 ANXA6-209ENST00000520054 487 ntTSL 38.63□□□□□ -1.035e-9■□□□□ 10.9
PRPF8Q6P2Q9 PPFIBP2-213ENST00000529575 780 ntTSL 37.13□□□□□ -1.275e-9■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.663e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.96□□□□□ -1.943e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-213ENST00000524288 732 ntTSL 1 (best)2.85□□□□□ -1.953e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-201ENST00000328392 572 ntTSL 51.89□□□□□ -2.113e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-212ENST00000523966 899 ntTSL 31.89□□□□□ -2.113e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-205ENST00000519054 654 ntTSL 31.72□□□□□ -2.133e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.183e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.183e-6■□□□□ 10.9
PRPF8Q6P2Q9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.62□□□□□ -2.313e-6■□□□□ 10.9
PRPF8Q6P2Q9 FAM117A-206ENST00000506156 714 ntAPPRIS ALT2 TSL 322.87■■□□□ 1.253e-8■□□□□ 10.9
PRPF8Q6P2Q9 FAM117A-210ENST00000514018 1128 ntTSL 515□□□□□ -0.013e-8■□□□□ 10.9
PRPF8Q6P2Q9 FAM117A-205ENST00000505159 739 ntTSL 312.56□□□□□ -0.43e-8■□□□□ 10.9
PRPF8Q6P2Q9 FAM117A-212ENST00000515240 624 ntTSL 410.58□□□□□ -0.723e-8■□□□□ 10.9
PRPF8Q6P2Q9 FAM117A-204ENST00000503855 582 ntTSL 39.94□□□□□ -0.823e-8■□□□□ 10.9
PRPF8Q6P2Q9 PRRC2A-206ENST00000464890 593 ntTSL 212.28□□□□□ -0.448e-10■□□□□ 10.9
PRPF8Q6P2Q9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.666e-9■□□□□ 10.9
PRPF8Q6P2Q9 EXOC7-214ENST00000486053 500 ntTSL 312.66□□□□□ -0.382e-14■□□□□ 10.9
PRPF8Q6P2Q9 RPL23-209ENST00000584056 549 ntTSL 28.45□□□□□ -1.068e-10■□□□□ 10.9
PRPF8Q6P2Q9 MTRR-216ENST00000509961 492 ntTSL 34.39□□□□□ -1.714e-7■□□□□ 10.9
PRPF8Q6P2Q9 MTRR-212ENST00000508101 584 ntTSL 52.72□□□□□ -1.974e-7■□□□□ 10.9
PRPF8Q6P2Q9 DANCR-203ENST00000441504 336 ntTSL 215.06■□□□□ 06e-22■□□□□ 10.9
PRPF8Q6P2Q9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.99□□□□□ -0.176e-22■□□□□ 10.9
PRPF8Q6P2Q9 TCF25-219ENST00000566751 383 ntTSL 56.89□□□□□ -1.312e-7■□□□□ 10.9
PRPF8Q6P2Q9 B4GALNT4-203ENST00000526584 421 ntTSL 314.85□□□□□ -0.036e-9■□□□□ 10.9
PRPF8Q6P2Q9 TFDP2-201ENST00000464782 640 ntTSL 418.22■□□□□ 0.511e-6■□□□□ 10.9
PRPF8Q6P2Q9 BRD4-207ENST00000595926 582 ntTSL 217.14■□□□□ 0.332e-7■□□□□ 10.9
PRPF8Q6P2Q9 GLT8D1-203ENST00000463762 726 ntTSL 216.62■□□□□ 0.251e-6■□□□□ 10.9
PRPF8Q6P2Q9 ANLN-203ENST00000418118 463 ntTSL 315.56■□□□□ 0.081e-6■□□□□ 10.9
PRPF8Q6P2Q9 STK25-221ENST00000462953 453 ntTSL 314.16□□□□□ -0.145e-13■□□□□ 10.9
PRPF8Q6P2Q9 CBFA2T3-206ENST00000563920 1815 ntTSL 214.04□□□□□ -0.161e-6■□□□□ 10.9
PRPF8Q6P2Q9 TUBB2A-202ENST00000489942 817 ntTSL 213.48□□□□□ -0.251e-6■□□□□ 10.9
PRPF8Q6P2Q9 PHKA2-203ENST00000469485 1945 ntTSL 213.06□□□□□ -0.321e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.351e-6■□□□□ 10.9
PRPF8Q6P2Q9 BUD31-208ENST00000473447 480 ntTSL 211.53□□□□□ -0.561e-6■□□□□ 10.9
PRPF8Q6P2Q9 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC11.3□□□□□ -0.62e-10■□□□□ 10.9
PRPF8Q6P2Q9 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.631e-6■□□□□ 10.9
PRPF8Q6P2Q9 PAN2-216ENST00000550555 507 ntTSL 410.41□□□□□ -0.741e-6■□□□□ 10.9
Retrieved 100 of 73,762 protein–RNA pairs in 634.2 ms