RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 NISCHQ9Y2I1 1504 aa19.43■□□□□ 0.7
CDV3-202ENST00000420115 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
CDV3-202ENST00000420115 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
CDV3-202ENST00000420115 PPARGC1BQ86YN6 1023 aaKnown RBP16.87■□□□□ 0.29
CDV3-202ENST00000420115 HRCP23327 699 aa16.85■□□□□ 0.29
CDV3-202ENST00000420115 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
CDV3-202ENST00000420115 MYT1Q01538 1121 aa16.67■□□□□ 0.26
CDV3-202ENST00000420115 MYO15BQ96JP2 1530 aa16.63■□□□□ 0.25
CDV3-202ENST00000420115 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
CDV3-202ENST00000420115 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
CDV3-202ENST00000420115 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
CDV3-202ENST00000420115 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
CDV3-202ENST00000420115 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
CDV3-202ENST00000420115 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
CDV3-202ENST00000420115 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
CDV3-202ENST00000420115 PRKCSHP14314 528 aaPredicted RBP16.11■□□□□ 0.17
CDV3-202ENST00000420115 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
CDV3-202ENST00000420115 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
CDV3-202ENST00000420115 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
CDV3-202ENST00000420115 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
CDV3-202ENST00000420115 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
CDV3-202ENST00000420115 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
CDV3-202ENST00000420115 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
CDV3-202ENST00000420115 TTBK1Q5TCY1 1321 aaPredicted RBP15.77■□□□□ 0.11
CDV3-202ENST00000420115 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
CDV3-202ENST00000420115 ABCC9O60706 1549 aa15.69■□□□□ 0.1
CDV3-202ENST00000420115 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
CDV3-202ENST00000420115 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
CDV3-202ENST00000420115 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
CDV3-202ENST00000420115 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
CDV3-202ENST00000420115 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
CDV3-202ENST00000420115 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
CDV3-202ENST00000420115 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
CDV3-202ENST00000420115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
CDV3-202ENST00000420115 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
CDV3-202ENST00000420115 YTHDC1Q96MU7 727 aaKnown RBP15.34■□□□□ 0.05
CDV3-202ENST00000420115 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
CDV3-202ENST00000420115 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
CDV3-202ENST00000420115 ANP32EQ9BTT0 268 aa15.3■□□□□ 0.04
CDV3-202ENST00000420115 APLP2Q06481 763 aa15.23■□□□□ 0.03
CDV3-202ENST00000420115 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
CDV3-202ENST00000420115 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
CDV3-202ENST00000420115 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
CDV3-202ENST00000420115 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
CDV3-202ENST00000420115 WIZO95785 1651 aa15.08■□□□□ 0.01
CDV3-202ENST00000420115 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0
CDV3-202ENST00000420115 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
CDV3-202ENST00000420115 CEP162Q5TB80 1403 aa15.02■□□□□ -0
CDV3-202ENST00000420115 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
CDV3-202ENST00000420115 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
CDV3-202ENST00000420115 NACADO15069 1562 aa14.95□□□□□ -0.02
CDV3-202ENST00000420115 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
CDV3-202ENST00000420115 CCDC136Q96JN2 1154 aa14.94□□□□□ -0.02
CDV3-202ENST00000420115 MIER1Q8N108 512 aa14.93□□□□□ -0.02
CDV3-202ENST00000420115 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
CDV3-202ENST00000420115 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
CDV3-202ENST00000420115 SOGA1O94964 1423 aa14.87□□□□□ -0.03
CDV3-202ENST00000420115 EEA1Q15075 1411 aa14.86□□□□□ -0.03
CDV3-202ENST00000420115 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
CDV3-202ENST00000420115 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
CDV3-202ENST00000420115 GOLGA3Q08378 1498 aa14.79□□□□□ -0.04
CDV3-202ENST00000420115 SALL2Q9Y467 1007 aaPredicted RBP14.79□□□□□ -0.04
CDV3-202ENST00000420115 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
CDV3-202ENST00000420115 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
CDV3-202ENST00000420115 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
CDV3-202ENST00000420115 CLSPNQ9HAW4 1339 aa14.75□□□□□ -0.05
CDV3-202ENST00000420115 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
CDV3-202ENST00000420115 BCANQ96GW7 911 aa14.71□□□□□ -0.05
CDV3-202ENST00000420115 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
CDV3-202ENST00000420115 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.7□□□□□ -0.06
CDV3-202ENST00000420115 PLEKHG5O94827 1062 aa14.69□□□□□ -0.06
CDV3-202ENST00000420115 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
CDV3-202ENST00000420115 CLIP1P30622 1438 aa14.64□□□□□ -0.07
CDV3-202ENST00000420115 KIF21BO75037 1637 aa14.64□□□□□ -0.07
CDV3-202ENST00000420115 VPS8Q8N3P4 1428 aa14.64□□□□□ -0.07
CDV3-202ENST00000420115 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
CDV3-202ENST00000420115 SLC24A1O60721 1099 aa14.6□□□□□ -0.07
CDV3-202ENST00000420115 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
CDV3-202ENST00000420115 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
CDV3-202ENST00000420115 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
CDV3-202ENST00000420115 UBE2Q2Q8WVN8 375 aa14.52□□□□□ -0.09
CDV3-202ENST00000420115 SYNJ1O43426 1573 aa14.52□□□□□ -0.09
CDV3-202ENST00000420115 DEKP35659 375 aaKnown RBP14.51□□□□□ -0.09
CDV3-202ENST00000420115 MSH5O43196 834 aa14.5□□□□□ -0.09
CDV3-202ENST00000420115 RBM19Q9Y4C8 960 aaKnown RBP14.49□□□□□ -0.09
CDV3-202ENST00000420115 RAPGEF2Q9Y4G8 1499 aa14.48□□□□□ -0.09
CDV3-202ENST00000420115 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
CDV3-202ENST00000420115 ITGAEP38570 1179 aa14.42□□□□□ -0.1
CDV3-202ENST00000420115 RANGAP1P46060 587 aaPredicted RBP14.41□□□□□ -0.1
CDV3-202ENST00000420115 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
CDV3-202ENST00000420115 PKNOX2Q96KN3 472 aa14.38□□□□□ -0.11
CDV3-202ENST00000420115 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
CDV3-202ENST00000420115 CUX2O14529 1486 aa14.37□□□□□ -0.11
CDV3-202ENST00000420115 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
CDV3-202ENST00000420115 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
CDV3-202ENST00000420115 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
CDV3-202ENST00000420115 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
CDV3-202ENST00000420115 NBR1Q14596 966 aa14.33□□□□□ -0.11
CDV3-202ENST00000420115 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
CDV3-202ENST00000420115 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms