RNA–Protein interactions for RNA: ENST00000563920.1

CBFA2T3-206, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 1,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-206ENST00000563920 NISCHQ9Y2I1 1504 aa40.15■■■■■ 4.02
CBFA2T3-206ENST00000563920 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
CBFA2T3-206ENST00000563920 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
CBFA2T3-206ENST00000563920 ABCC9O60706 1549 aa33.35■■■□□ 2.93
CBFA2T3-206ENST00000563920 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
CBFA2T3-206ENST00000563920 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
CBFA2T3-206ENST00000563920 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.84
CBFA2T3-206ENST00000563920 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
CBFA2T3-206ENST00000563920 NACADO15069 1562 aa32.63■■■□□ 2.81
CBFA2T3-206ENST00000563920 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
CBFA2T3-206ENST00000563920 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
CBFA2T3-206ENST00000563920 UNC13AQ9UPW8 1703 aa31.93■■■□□ 2.7
CBFA2T3-206ENST00000563920 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
CBFA2T3-206ENST00000563920 PABPN1Q86U42 306 aaKnown RBP eCLIP31.45■■■□□ 2.62
CBFA2T3-206ENST00000563920 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
CBFA2T3-206ENST00000563920 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
CBFA2T3-206ENST00000563920 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
CBFA2T3-206ENST00000563920 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
CBFA2T3-206ENST00000563920 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
CBFA2T3-206ENST00000563920 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
CBFA2T3-206ENST00000563920 WIZO95785 1651 aa30.85■■■□□ 2.53
CBFA2T3-206ENST00000563920 EIF4G1Q04637 1599 aaKnown RBP30.56■■■□□ 2.48
CBFA2T3-206ENST00000563920 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
CBFA2T3-206ENST00000563920 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
CBFA2T3-206ENST00000563920 ATAD2BQ9ULI0 1458 aa30.42■■■□□ 2.46
CBFA2T3-206ENST00000563920 SMARCA2P51531 1590 aa30.33■■■□□ 2.45
CBFA2T3-206ENST00000563920 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
CBFA2T3-206ENST00000563920 CC2D2AQ9P2K1 1620 aa30.17■■■□□ 2.42
CBFA2T3-206ENST00000563920 CCDC88BA6NC98 1476 aa30.16■■■□□ 2.42
CBFA2T3-206ENST00000563920 NCAPD3P42695 1498 aa30.14■■■□□ 2.42
CBFA2T3-206ENST00000563920 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
CBFA2T3-206ENST00000563920 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
CBFA2T3-206ENST00000563920 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.33
CBFA2T3-206ENST00000563920 ABCC8Q09428 1581 aa29.54■■■□□ 2.32
CBFA2T3-206ENST00000563920 CFTRP13569 1480 aa29.45■■■□□ 2.31
CBFA2T3-206ENST00000563920 TRIM41Q8WV44 630 aa29.43■■■□□ 2.3
CBFA2T3-206ENST00000563920 CADPSQ9ULU8 1353 aa29.36■■■□□ 2.29
CBFA2T3-206ENST00000563920 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
CBFA2T3-206ENST00000563920 NESP48681 1621 aa29.29■■■□□ 2.28
CBFA2T3-206ENST00000563920 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.27
CBFA2T3-206ENST00000563920 SYNJ1O43426 1573 aa29.23■■■□□ 2.27
CBFA2T3-206ENST00000563920 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
CBFA2T3-206ENST00000563920 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
CBFA2T3-206ENST00000563920 CUX1P39880 1505 aa29.06■■■□□ 2.24
CBFA2T3-206ENST00000563920 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
CBFA2T3-206ENST00000563920 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
CBFA2T3-206ENST00000563920 FAM9AQ8IZU1 332 aaPredicted RBP29.01■■■□□ 2.23
CBFA2T3-206ENST00000563920 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
CBFA2T3-206ENST00000563920 SOGA1O94964 1423 aa28.93■■■□□ 2.22
CBFA2T3-206ENST00000563920 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
CBFA2T3-206ENST00000563920 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.22
CBFA2T3-206ENST00000563920 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CBFA2T3-206ENST00000563920 CEP164Q9UPV0 1460 aa28.86■■■□□ 2.21
CBFA2T3-206ENST00000563920 URB2Q14146 1524 aaKnown RBP28.78■■■□□ 2.2
CBFA2T3-206ENST00000563920 DNMBPQ6XZF7 1577 aa28.78■■■□□ 2.2
CBFA2T3-206ENST00000563920 TOPBP1Q92547 1522 aa28.76■■■□□ 2.19
CBFA2T3-206ENST00000563920 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
CBFA2T3-206ENST00000563920 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
CBFA2T3-206ENST00000563920 EEA1Q15075 1411 aa28.64■■■□□ 2.18
CBFA2T3-206ENST00000563920 POLA1P09884 1462 aaPredicted RBP28.61■■■□□ 2.17
CBFA2T3-206ENST00000563920 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
CBFA2T3-206ENST00000563920 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
CBFA2T3-206ENST00000563920 RAD54L2Q9Y4B4 1467 aa28.57■■■□□ 2.16
CBFA2T3-206ENST00000563920 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
CBFA2T3-206ENST00000563920 CUX2O14529 1486 aa28.5■■■□□ 2.15
CBFA2T3-206ENST00000563920 KIF27Q86VH2 1401 aa28.47■■■□□ 2.15
CBFA2T3-206ENST00000563920 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
CBFA2T3-206ENST00000563920 WDR62O43379 1518 aa28.45■■■□□ 2.14
CBFA2T3-206ENST00000563920 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
CBFA2T3-206ENST00000563920 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
CBFA2T3-206ENST00000563920 KIF21BO75037 1637 aa28.4■■■□□ 2.14
CBFA2T3-206ENST00000563920 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
CBFA2T3-206ENST00000563920 GOLGA3Q08378 1498 aa28.32■■■□□ 2.12
CBFA2T3-206ENST00000563920 RAPGEF2Q9Y4G8 1499 aa28.32■■■□□ 2.12
CBFA2T3-206ENST00000563920 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
CBFA2T3-206ENST00000563920 IGF1RP08069 1367 aa28.31■■■□□ 2.12
CBFA2T3-206ENST00000563920 TDRD9Q8NDG6 1382 aaKnown RBP28.27■■■□□ 2.12
CBFA2T3-206ENST00000563920 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
CBFA2T3-206ENST00000563920 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
CBFA2T3-206ENST00000563920 UBTFP17480 764 aaKnown RBP28.21■■■□□ 2.11
CBFA2T3-206ENST00000563920 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
CBFA2T3-206ENST00000563920 IFT140Q96RY7 1462 aa28.17■■■□□ 2.1
CBFA2T3-206ENST00000563920 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
CBFA2T3-206ENST00000563920 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
CBFA2T3-206ENST00000563920 AQRO60306 1485 aaKnown RBP eCLIP28.13■■■□□ 2.096e-9■■■■□ 23.8
CBFA2T3-206ENST00000563920 CARMIL1Q5VZK9 1371 aa28.13■■■□□ 2.09
CBFA2T3-206ENST00000563920 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
CBFA2T3-206ENST00000563920 PBRM1Q86U86 1689 aa28.08■■■□□ 2.09
CBFA2T3-206ENST00000563920 CUL7Q14999 1698 aa28.06■■■□□ 2.08
CBFA2T3-206ENST00000563920 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
CBFA2T3-206ENST00000563920 GRIN2BQ13224 1484 aa27.94■■■□□ 2.06
CBFA2T3-206ENST00000563920 RANGAP1P46060 587 aaPredicted RBP27.91■■■□□ 2.06
CBFA2T3-206ENST00000563920 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
CBFA2T3-206ENST00000563920 CLIP1P30622 1438 aa27.89■■■□□ 2.06
CBFA2T3-206ENST00000563920 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
CBFA2T3-206ENST00000563920 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
CBFA2T3-206ENST00000563920 CTTNBP2Q8WZ74 1663 aa27.79■■■□□ 2.04
CBFA2T3-206ENST00000563920 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
CBFA2T3-206ENST00000563920 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
CBFA2T3-206ENST00000563920 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms