RNA–Protein interactions for RNA: ENST00000464890.1

PRRC2A-206, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 2

Gene PRRC2A, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-206ENST00000464890 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
PRRC2A-206ENST00000464890 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
PRRC2A-206ENST00000464890 ABCC9O60706 1549 aa29.84■■■□□ 2.37
PRRC2A-206ENST00000464890 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
PRRC2A-206ENST00000464890 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.27
PRRC2A-206ENST00000464890 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
PRRC2A-206ENST00000464890 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
PRRC2A-206ENST00000464890 NACADO15069 1562 aa29.01■■■□□ 2.24
PRRC2A-206ENST00000464890 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
PRRC2A-206ENST00000464890 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
PRRC2A-206ENST00000464890 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
PRRC2A-206ENST00000464890 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
PRRC2A-206ENST00000464890 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
PRRC2A-206ENST00000464890 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
PRRC2A-206ENST00000464890 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
PRRC2A-206ENST00000464890 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
PRRC2A-206ENST00000464890 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
PRRC2A-206ENST00000464890 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
PRRC2A-206ENST00000464890 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
PRRC2A-206ENST00000464890 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
PRRC2A-206ENST00000464890 WIZO95785 1651 aa27.09■■□□□ 1.93
PRRC2A-206ENST00000464890 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
PRRC2A-206ENST00000464890 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
PRRC2A-206ENST00000464890 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
PRRC2A-206ENST00000464890 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
PRRC2A-206ENST00000464890 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
PRRC2A-206ENST00000464890 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
PRRC2A-206ENST00000464890 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
PRRC2A-206ENST00000464890 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
PRRC2A-206ENST00000464890 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
PRRC2A-206ENST00000464890 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
PRRC2A-206ENST00000464890 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
PRRC2A-206ENST00000464890 NESP48681 1621 aa26.09■■□□□ 1.77
PRRC2A-206ENST00000464890 CFTRP13569 1480 aa26.06■■□□□ 1.76
PRRC2A-206ENST00000464890 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
PRRC2A-206ENST00000464890 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
PRRC2A-206ENST00000464890 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.75
PRRC2A-206ENST00000464890 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
PRRC2A-206ENST00000464890 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
PRRC2A-206ENST00000464890 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
PRRC2A-206ENST00000464890 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
PRRC2A-206ENST00000464890 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
PRRC2A-206ENST00000464890 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
PRRC2A-206ENST00000464890 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
PRRC2A-206ENST00000464890 CUX1P39880 1505 aa25.59■■□□□ 1.69
PRRC2A-206ENST00000464890 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
PRRC2A-206ENST00000464890 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
PRRC2A-206ENST00000464890 ERCC6Q03468 1493 aa25.55■■□□□ 1.68
PRRC2A-206ENST00000464890 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
PRRC2A-206ENST00000464890 TOP2BQ02880 1626 aa25.5■■□□□ 1.67
PRRC2A-206ENST00000464890 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
PRRC2A-206ENST00000464890 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
PRRC2A-206ENST00000464890 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
PRRC2A-206ENST00000464890 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
PRRC2A-206ENST00000464890 WDR62O43379 1518 aa25.41■■□□□ 1.66
PRRC2A-206ENST00000464890 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
PRRC2A-206ENST00000464890 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
PRRC2A-206ENST00000464890 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
PRRC2A-206ENST00000464890 CUX2O14529 1486 aa25.24■■□□□ 1.63
PRRC2A-206ENST00000464890 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
PRRC2A-206ENST00000464890 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
PRRC2A-206ENST00000464890 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
PRRC2A-206ENST00000464890 SOGA1O94964 1423 aa25.16■■□□□ 1.62
PRRC2A-206ENST00000464890 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
PRRC2A-206ENST00000464890 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
PRRC2A-206ENST00000464890 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
PRRC2A-206ENST00000464890 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
PRRC2A-206ENST00000464890 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
PRRC2A-206ENST00000464890 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
PRRC2A-206ENST00000464890 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
PRRC2A-206ENST00000464890 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.584e-12■■■■■ 44.7
PRRC2A-206ENST00000464890 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
PRRC2A-206ENST00000464890 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
PRRC2A-206ENST00000464890 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
PRRC2A-206ENST00000464890 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
PRRC2A-206ENST00000464890 EEA1Q15075 1411 aa24.86■■□□□ 1.57
PRRC2A-206ENST00000464890 IGF1RP08069 1367 aa24.84■■□□□ 1.57
PRRC2A-206ENST00000464890 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
PRRC2A-206ENST00000464890 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
PRRC2A-206ENST00000464890 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
PRRC2A-206ENST00000464890 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
PRRC2A-206ENST00000464890 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
PRRC2A-206ENST00000464890 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
PRRC2A-206ENST00000464890 KIF21BO75037 1637 aa24.69■■□□□ 1.54
PRRC2A-206ENST00000464890 CUL7Q14999 1698 aa24.69■■□□□ 1.54
PRRC2A-206ENST00000464890 EHMT2Q96KQ7 1210 aa24.67■■□□□ 1.54
PRRC2A-206ENST00000464890 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
PRRC2A-206ENST00000464890 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
PRRC2A-206ENST00000464890 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
PRRC2A-206ENST00000464890 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
PRRC2A-206ENST00000464890 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
PRRC2A-206ENST00000464890 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
PRRC2A-206ENST00000464890 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
PRRC2A-206ENST00000464890 CHD1O14646 1710 aa24.52■■□□□ 1.52
PRRC2A-206ENST00000464890 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
PRRC2A-206ENST00000464890 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
PRRC2A-206ENST00000464890 FBLN2P98095 1184 aa24.41■■□□□ 1.5
PRRC2A-206ENST00000464890 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
PRRC2A-206ENST00000464890 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.49
PRRC2A-206ENST00000464890 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms