RNA–Protein interactions for RNA: ENST00000550555.1

PAN2-216, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 4

Gene PAN2, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-216ENST00000550555 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
PAN2-216ENST00000550555 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
PAN2-216ENST00000550555 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PAN2-216ENST00000550555 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
PAN2-216ENST00000550555 NACADO15069 1562 aa25.33■■□□□ 1.65
PAN2-216ENST00000550555 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
PAN2-216ENST00000550555 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
PAN2-216ENST00000550555 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
PAN2-216ENST00000550555 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
PAN2-216ENST00000550555 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
PAN2-216ENST00000550555 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
PAN2-216ENST00000550555 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
PAN2-216ENST00000550555 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
PAN2-216ENST00000550555 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
PAN2-216ENST00000550555 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
PAN2-216ENST00000550555 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
PAN2-216ENST00000550555 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
PAN2-216ENST00000550555 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
PAN2-216ENST00000550555 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
PAN2-216ENST00000550555 SMARCA4P51532 1647 aa23.36■■□□□ 1.33
PAN2-216ENST00000550555 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
PAN2-216ENST00000550555 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
PAN2-216ENST00000550555 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
PAN2-216ENST00000550555 BAZ1AQ9NRL2 1556 aaPredicted RBP23.24■■□□□ 1.31
PAN2-216ENST00000550555 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
PAN2-216ENST00000550555 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
PAN2-216ENST00000550555 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
PAN2-216ENST00000550555 NESP48681 1621 aa22.93■■□□□ 1.26
PAN2-216ENST00000550555 CUX2O14529 1486 aa22.93■■□□□ 1.26
PAN2-216ENST00000550555 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
PAN2-216ENST00000550555 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
PAN2-216ENST00000550555 WIZO95785 1651 aa22.81■■□□□ 1.24
PAN2-216ENST00000550555 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
PAN2-216ENST00000550555 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
PAN2-216ENST00000550555 DNAJC5Q9H3Z4 198 aa22.66■■□□□ 1.22
PAN2-216ENST00000550555 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
PAN2-216ENST00000550555 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
PAN2-216ENST00000550555 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
PAN2-216ENST00000550555 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
PAN2-216ENST00000550555 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
PAN2-216ENST00000550555 WDR62O43379 1518 aa22.46■■□□□ 1.19
PAN2-216ENST00000550555 CFTRP13569 1480 aa22.45■■□□□ 1.18
PAN2-216ENST00000550555 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
PAN2-216ENST00000550555 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
PAN2-216ENST00000550555 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
PAN2-216ENST00000550555 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
PAN2-216ENST00000550555 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
PAN2-216ENST00000550555 TOPBP1Q92547 1522 aa22■■□□□ 1.11
PAN2-216ENST00000550555 IFT140Q96RY7 1462 aa21.95■■□□□ 1.1
PAN2-216ENST00000550555 DNMBPQ6XZF7 1577 aa21.95■■□□□ 1.1
PAN2-216ENST00000550555 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
PAN2-216ENST00000550555 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
PAN2-216ENST00000550555 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.08
PAN2-216ENST00000550555 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
PAN2-216ENST00000550555 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
PAN2-216ENST00000550555 OSCARQ8IYS5 282 aa21.78■■□□□ 1.08
PAN2-216ENST00000550555 CUX1P39880 1505 aa21.69■■□□□ 1.06
PAN2-216ENST00000550555 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.06
PAN2-216ENST00000550555 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
PAN2-216ENST00000550555 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
PAN2-216ENST00000550555 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
PAN2-216ENST00000550555 CHD1O14646 1710 aa21.63■■□□□ 1.05
PAN2-216ENST00000550555 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
PAN2-216ENST00000550555 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
PAN2-216ENST00000550555 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
PAN2-216ENST00000550555 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
PAN2-216ENST00000550555 SOGA1O94964 1423 aa21.61■■□□□ 1.05
PAN2-216ENST00000550555 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
PAN2-216ENST00000550555 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
PAN2-216ENST00000550555 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
PAN2-216ENST00000550555 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
PAN2-216ENST00000550555 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
PAN2-216ENST00000550555 GRIN2BQ13224 1484 aa21.45■■□□□ 1.03
PAN2-216ENST00000550555 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PAN2-216ENST00000550555 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
PAN2-216ENST00000550555 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
PAN2-216ENST00000550555 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
PAN2-216ENST00000550555 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
PAN2-216ENST00000550555 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.02
PAN2-216ENST00000550555 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
PAN2-216ENST00000550555 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
PAN2-216ENST00000550555 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
PAN2-216ENST00000550555 FBLN2P98095 1184 aa21.37■■□□□ 1.01
PAN2-216ENST00000550555 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
PAN2-216ENST00000550555 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
PAN2-216ENST00000550555 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
PAN2-216ENST00000550555 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
PAN2-216ENST00000550555 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
PAN2-216ENST00000550555 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
PAN2-216ENST00000550555 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
PAN2-216ENST00000550555 NUP160Q12769 1436 aa21.15■□□□□ 0.98
PAN2-216ENST00000550555 CEP170Q5SW79 1584 aa21.14■□□□□ 0.98
PAN2-216ENST00000550555 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
PAN2-216ENST00000550555 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
PAN2-216ENST00000550555 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
PAN2-216ENST00000550555 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
PAN2-216ENST00000550555 CUL7Q14999 1698 aa20.9■□□□□ 0.94
PAN2-216ENST00000550555 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
PAN2-216ENST00000550555 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
PAN2-216ENST00000550555 IGF1RP08069 1367 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms