RNA–Protein interactions for RNA: ENST00000498828.1

RNF7-207, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-207ENST00000498828 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
RNF7-207ENST00000498828 ABCC9O60706 1549 aa30.29■■■□□ 2.44
RNF7-207ENST00000498828 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
RNF7-207ENST00000498828 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
RNF7-207ENST00000498828 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
RNF7-207ENST00000498828 NACADO15069 1562 aa28.37■■■□□ 2.13
RNF7-207ENST00000498828 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
RNF7-207ENST00000498828 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
RNF7-207ENST00000498828 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
RNF7-207ENST00000498828 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
RNF7-207ENST00000498828 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
RNF7-207ENST00000498828 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
RNF7-207ENST00000498828 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
RNF7-207ENST00000498828 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
RNF7-207ENST00000498828 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
RNF7-207ENST00000498828 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
RNF7-207ENST00000498828 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
RNF7-207ENST00000498828 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
RNF7-207ENST00000498828 DNAJC5Q9H3Z4 198 aa26.69■■□□□ 1.86
RNF7-207ENST00000498828 CUX2O14529 1486 aa26.28■■□□□ 1.8
RNF7-207ENST00000498828 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
RNF7-207ENST00000498828 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
RNF7-207ENST00000498828 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
RNF7-207ENST00000498828 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
RNF7-207ENST00000498828 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
RNF7-207ENST00000498828 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
RNF7-207ENST00000498828 NESP48681 1621 aa25.91■■□□□ 1.74
RNF7-207ENST00000498828 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
RNF7-207ENST00000498828 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
RNF7-207ENST00000498828 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
RNF7-207ENST00000498828 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
RNF7-207ENST00000498828 LAMC3Q9Y6N6 1575 aa25.68■■□□□ 1.7
RNF7-207ENST00000498828 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
RNF7-207ENST00000498828 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
RNF7-207ENST00000498828 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
RNF7-207ENST00000498828 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
RNF7-207ENST00000498828 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
RNF7-207ENST00000498828 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
RNF7-207ENST00000498828 WDR62O43379 1518 aa25.3■■□□□ 1.64
RNF7-207ENST00000498828 WIZO95785 1651 aa25.22■■□□□ 1.63
RNF7-207ENST00000498828 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
RNF7-207ENST00000498828 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
RNF7-207ENST00000498828 CFTRP13569 1480 aa24.99■■□□□ 1.59
RNF7-207ENST00000498828 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
RNF7-207ENST00000498828 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
RNF7-207ENST00000498828 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
RNF7-207ENST00000498828 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
RNF7-207ENST00000498828 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
RNF7-207ENST00000498828 RIMBP3CA6NJZ7 1639 aa24.76■■□□□ 1.55
RNF7-207ENST00000498828 RIMBP3BA6NNM3 1639 aa24.76■■□□□ 1.55
RNF7-207ENST00000498828 RIMBP3Q9UFD9 1639 aa24.76■■□□□ 1.55
RNF7-207ENST00000498828 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
RNF7-207ENST00000498828 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
RNF7-207ENST00000498828 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
RNF7-207ENST00000498828 TOPBP1Q92547 1522 aa24.57■■□□□ 1.52
RNF7-207ENST00000498828 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
RNF7-207ENST00000498828 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
RNF7-207ENST00000498828 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
RNF7-207ENST00000498828 CHD1O14646 1710 aa24.47■■□□□ 1.51
RNF7-207ENST00000498828 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
RNF7-207ENST00000498828 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
RNF7-207ENST00000498828 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
RNF7-207ENST00000498828 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.493e-6■■■■□ 23.2
RNF7-207ENST00000498828 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
RNF7-207ENST00000498828 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
RNF7-207ENST00000498828 TRHP20396 242 aaPredicted RBP24.28■■□□□ 1.48
RNF7-207ENST00000498828 FBLN2P98095 1184 aa24.28■■□□□ 1.48
RNF7-207ENST00000498828 RAD54L2Q9Y4B4 1467 aa24.2■■□□□ 1.47
RNF7-207ENST00000498828 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
RNF7-207ENST00000498828 SOGA1O94964 1423 aa24.15■■□□□ 1.46
RNF7-207ENST00000498828 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
RNF7-207ENST00000498828 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
RNF7-207ENST00000498828 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
RNF7-207ENST00000498828 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
RNF7-207ENST00000498828 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
RNF7-207ENST00000498828 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
RNF7-207ENST00000498828 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
RNF7-207ENST00000498828 CUX1P39880 1505 aa24■■□□□ 1.43
RNF7-207ENST00000498828 GRIN2BQ13224 1484 aa24■■□□□ 1.43
RNF7-207ENST00000498828 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
RNF7-207ENST00000498828 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
RNF7-207ENST00000498828 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
RNF7-207ENST00000498828 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
RNF7-207ENST00000498828 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
RNF7-207ENST00000498828 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
RNF7-207ENST00000498828 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
RNF7-207ENST00000498828 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
RNF7-207ENST00000498828 ADAMTS12P58397 1594 aa23.66■■□□□ 1.38
RNF7-207ENST00000498828 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
RNF7-207ENST00000498828 NUP160Q12769 1436 aa23.63■■□□□ 1.37
RNF7-207ENST00000498828 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
RNF7-207ENST00000498828 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
RNF7-207ENST00000498828 KIF13AQ9H1H9 1805 aa23.55■■□□□ 1.36
RNF7-207ENST00000498828 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
RNF7-207ENST00000498828 BIVM-ERCC5R4GMW8 1640 aa23.54■■□□□ 1.36
RNF7-207ENST00000498828 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
RNF7-207ENST00000498828 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
RNF7-207ENST00000498828 PRG4Q92954 1404 aaPredicted RBP23.42■■□□□ 1.34
RNF7-207ENST00000498828 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
RNF7-207ENST00000498828 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms