RNA–Protein interactions for RNA: ENST00000511392.5

CDV3-208, Transcript of CDV3 homolog, humanhuman

TSL 5 BASIC

Gene CDV3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-208ENST00000511392 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
CDV3-208ENST00000511392 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
CDV3-208ENST00000511392 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
CDV3-208ENST00000511392 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
CDV3-208ENST00000511392 FOXD1Q16676 465 aa16.42■□□□□ 0.22
CDV3-208ENST00000511392 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
CDV3-208ENST00000511392 MSH5O43196 834 aa15.56■□□□□ 0.08
CDV3-208ENST00000511392 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
CDV3-208ENST00000511392 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
CDV3-208ENST00000511392 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
CDV3-208ENST00000511392 ADRA2BP18089 450 aa15.19■□□□□ 0.02
CDV3-208ENST00000511392 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
CDV3-208ENST00000511392 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
CDV3-208ENST00000511392 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
CDV3-208ENST00000511392 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
CDV3-208ENST00000511392 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
CDV3-208ENST00000511392 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
CDV3-208ENST00000511392 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
CDV3-208ENST00000511392 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
CDV3-208ENST00000511392 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
CDV3-208ENST00000511392 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
CDV3-208ENST00000511392 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
CDV3-208ENST00000511392 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
CDV3-208ENST00000511392 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
CDV3-208ENST00000511392 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
CDV3-208ENST00000511392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.359e-9■■■□□ 17
CDV3-208ENST00000511392 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
CDV3-208ENST00000511392 KCNA4P22459 653 aa12.47□□□□□ -0.41
CDV3-208ENST00000511392 CAPN15O75808 1086 aa12.37□□□□□ -0.43
CDV3-208ENST00000511392 APLP2Q06481 763 aa12.37□□□□□ -0.43
CDV3-208ENST00000511392 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
CDV3-208ENST00000511392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
CDV3-208ENST00000511392 DSG3P32926 999 aa12.29□□□□□ -0.44
CDV3-208ENST00000511392 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
CDV3-208ENST00000511392 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
CDV3-208ENST00000511392 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
CDV3-208ENST00000511392 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
CDV3-208ENST00000511392 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
CDV3-208ENST00000511392 ABCB7O75027 752 aa11.99□□□□□ -0.49
CDV3-208ENST00000511392 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
CDV3-208ENST00000511392 POTEHQ6S545 545 aa11.95□□□□□ -0.5
CDV3-208ENST00000511392 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
CDV3-208ENST00000511392 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
CDV3-208ENST00000511392 POLA2Q14181 598 aa11.78□□□□□ -0.52
CDV3-208ENST00000511392 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
CDV3-208ENST00000511392 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
CDV3-208ENST00000511392 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
CDV3-208ENST00000511392 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
CDV3-208ENST00000511392 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
CDV3-208ENST00000511392 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
CDV3-208ENST00000511392 NISCHQ9Y2I1 1504 aa11.45□□□□□ -0.58
CDV3-208ENST00000511392 ZBTB22O15209 634 aa11.41□□□□□ -0.58
CDV3-208ENST00000511392 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CDV3-208ENST00000511392 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
CDV3-208ENST00000511392 FBLN2P98095 1184 aa11.31□□□□□ -0.6
CDV3-208ENST00000511392 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
CDV3-208ENST00000511392 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
CDV3-208ENST00000511392 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
CDV3-208ENST00000511392 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
CDV3-208ENST00000511392 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
CDV3-208ENST00000511392 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
CDV3-208ENST00000511392 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
CDV3-208ENST00000511392 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
CDV3-208ENST00000511392 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDV3-208ENST00000511392 HAX1O00165 279 aa11.08□□□□□ -0.64
CDV3-208ENST00000511392 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
CDV3-208ENST00000511392 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
CDV3-208ENST00000511392 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
CDV3-208ENST00000511392 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
CDV3-208ENST00000511392 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
CDV3-208ENST00000511392 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
CDV3-208ENST00000511392 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDV3-208ENST00000511392 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
CDV3-208ENST00000511392 C19orf67A6NJJ6 358 aa10.82□□□□□ -0.68
CDV3-208ENST00000511392 EVX2Q03828 476 aa10.8□□□□□ -0.68
CDV3-208ENST00000511392 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
CDV3-208ENST00000511392 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
CDV3-208ENST00000511392 GABBR2O75899 941 aa10.66□□□□□ -0.7
CDV3-208ENST00000511392 CLCN6P51797 869 aa10.66□□□□□ -0.7
CDV3-208ENST00000511392 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
CDV3-208ENST00000511392 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
CDV3-208ENST00000511392 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
CDV3-208ENST00000511392 LHX8Q68G74 356 aa10.47□□□□□ -0.73
CDV3-208ENST00000511392 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
CDV3-208ENST00000511392 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
CDV3-208ENST00000511392 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
CDV3-208ENST00000511392 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
CDV3-208ENST00000511392 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDV3-208ENST00000511392 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
CDV3-208ENST00000511392 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
CDV3-208ENST00000511392 PROM2Q8N271 834 aa10.27□□□□□ -0.77
CDV3-208ENST00000511392 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
CDV3-208ENST00000511392 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
CDV3-208ENST00000511392 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
CDV3-208ENST00000511392 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
CDV3-208ENST00000511392 CCDC180Q9P1Z9 1646 aa10.22□□□□□ -0.77
CDV3-208ENST00000511392 FKBP8Q14318 412 aa10.1□□□□□ -0.79
CDV3-208ENST00000511392 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
CDV3-208ENST00000511392 MIER1Q8N108 512 aa10.1□□□□□ -0.79
CDV3-208ENST00000511392 C7P10643 843 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms