RNA–Protein interactions for RNA: ENST00000515421.1

CDV3-209, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-209ENST00000515421 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
CDV3-209ENST00000515421 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
CDV3-209ENST00000515421 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
CDV3-209ENST00000515421 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
CDV3-209ENST00000515421 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
CDV3-209ENST00000515421 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
CDV3-209ENST00000515421 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
CDV3-209ENST00000515421 KCNA4P22459 653 aa18.36■□□□□ 0.53
CDV3-209ENST00000515421 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
CDV3-209ENST00000515421 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
CDV3-209ENST00000515421 ADRA2BP18089 450 aa17.86■□□□□ 0.45
CDV3-209ENST00000515421 ABCC9O60706 1549 aa17.8■□□□□ 0.44
CDV3-209ENST00000515421 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
CDV3-209ENST00000515421 CCDC180Q9P1Z9 1646 aa17.73■□□□□ 0.43
CDV3-209ENST00000515421 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
CDV3-209ENST00000515421 FOXD1Q16676 465 aa17.59■□□□□ 0.41
CDV3-209ENST00000515421 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
CDV3-209ENST00000515421 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
CDV3-209ENST00000515421 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
CDV3-209ENST00000515421 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
CDV3-209ENST00000515421 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
CDV3-209ENST00000515421 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
CDV3-209ENST00000515421 ZBTB22O15209 634 aa16.92■□□□□ 0.3
CDV3-209ENST00000515421 MSH5O43196 834 aa16.92■□□□□ 0.3
CDV3-209ENST00000515421 NACADO15069 1562 aa16.85■□□□□ 0.29
CDV3-209ENST00000515421 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
CDV3-209ENST00000515421 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
CDV3-209ENST00000515421 DNAJC5BQ9UF47 199 aa16.73■□□□□ 0.27
CDV3-209ENST00000515421 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
CDV3-209ENST00000515421 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDV3-209ENST00000515421 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
CDV3-209ENST00000515421 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
CDV3-209ENST00000515421 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
CDV3-209ENST00000515421 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
CDV3-209ENST00000515421 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
CDV3-209ENST00000515421 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
CDV3-209ENST00000515421 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
CDV3-209ENST00000515421 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
CDV3-209ENST00000515421 FKBP8Q14318 412 aa16.22■□□□□ 0.19
CDV3-209ENST00000515421 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
CDV3-209ENST00000515421 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
CDV3-209ENST00000515421 CC2D2AQ9P2K1 1620 aa16.04■□□□□ 0.16
CDV3-209ENST00000515421 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
CDV3-209ENST00000515421 PLCB2Q00722 1185 aa15.96■□□□□ 0.15
CDV3-209ENST00000515421 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
CDV3-209ENST00000515421 BCANQ96GW7 911 aa15.92■□□□□ 0.14
CDV3-209ENST00000515421 PRKCSHP14314 528 aaPredicted RBP15.86■□□□□ 0.13
CDV3-209ENST00000515421 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
CDV3-209ENST00000515421 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
CDV3-209ENST00000515421 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
CDV3-209ENST00000515421 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
CDV3-209ENST00000515421 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
CDV3-209ENST00000515421 VSIG10Q8N0Z9 540 aa15.56■□□□□ 0.08
CDV3-209ENST00000515421 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
CDV3-209ENST00000515421 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
CDV3-209ENST00000515421 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
CDV3-209ENST00000515421 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
CDV3-209ENST00000515421 TPRNQ4KMQ1 711 aa15.5■□□□□ 0.07
CDV3-209ENST00000515421 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
CDV3-209ENST00000515421 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
CDV3-209ENST00000515421 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
CDV3-209ENST00000515421 CUX2O14529 1486 aa15.45■□□□□ 0.06
CDV3-209ENST00000515421 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
CDV3-209ENST00000515421 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
CDV3-209ENST00000515421 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
CDV3-209ENST00000515421 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
CDV3-209ENST00000515421 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.04
CDV3-209ENST00000515421 ARXQ96QS3 562 aa15.29■□□□□ 0.04
CDV3-209ENST00000515421 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
CDV3-209ENST00000515421 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
CDV3-209ENST00000515421 TIMELESSQ9UNS1 1208 aa15.24■□□□□ 0.03
CDV3-209ENST00000515421 NESP48681 1621 aa15.23■□□□□ 0.03
CDV3-209ENST00000515421 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
CDV3-209ENST00000515421 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
CDV3-209ENST00000515421 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
CDV3-209ENST00000515421 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
CDV3-209ENST00000515421 KDM2AQ9Y2K7 1162 aa15.16■□□□□ 0.02
CDV3-209ENST00000515421 TULP1O00294 542 aaPredicted RBP15.13■□□□□ 0.01
CDV3-209ENST00000515421 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
CDV3-209ENST00000515421 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
CDV3-209ENST00000515421 ERICH6Q7L0X2 663 aa15.07■□□□□ 0
CDV3-209ENST00000515421 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
CDV3-209ENST00000515421 FBLN2P98095 1184 aa15.03■□□□□ -0
CDV3-209ENST00000515421 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
CDV3-209ENST00000515421 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
CDV3-209ENST00000515421 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
CDV3-209ENST00000515421 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
CDV3-209ENST00000515421 MRC2Q9UBG0 1479 aa14.99□□□□□ -0.01
CDV3-209ENST00000515421 PKD2Q13563 968 aa14.97□□□□□ -0.01
CDV3-209ENST00000515421 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
CDV3-209ENST00000515421 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
CDV3-209ENST00000515421 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
CDV3-209ENST00000515421 WIZO95785 1651 aa14.94□□□□□ -0.02
CDV3-209ENST00000515421 WDR62O43379 1518 aa14.93□□□□□ -0.02
CDV3-209ENST00000515421 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
CDV3-209ENST00000515421 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
CDV3-209ENST00000515421 IFNLR1Q8IU57 520 aaPredicted RBP14.9□□□□□ -0.02
CDV3-209ENST00000515421 RSF1Q96T23 1441 aaPredicted RBP14.89□□□□□ -0.03
CDV3-209ENST00000515421 CFTRP13569 1480 aa14.89□□□□□ -0.03
CDV3-209ENST00000515421 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms