RNA–Protein interactions for RNA: ENST00000628955.1

PSMA6-217, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5 BASIC

Gene PSMA6, Length 364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-217ENST00000628955 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
PSMA6-217ENST00000628955 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
PSMA6-217ENST00000628955 ABCC9O60706 1549 aa28.58■■■□□ 2.17
PSMA6-217ENST00000628955 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
PSMA6-217ENST00000628955 RB1CC1Q8TDY2 1594 aa27.44■■□□□ 1.98
PSMA6-217ENST00000628955 NACADO15069 1562 aa27.39■■□□□ 1.98
PSMA6-217ENST00000628955 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
PSMA6-217ENST00000628955 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
PSMA6-217ENST00000628955 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
PSMA6-217ENST00000628955 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
PSMA6-217ENST00000628955 UNC13AQ9UPW8 1703 aa26.64■■□□□ 1.85
PSMA6-217ENST00000628955 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
PSMA6-217ENST00000628955 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
PSMA6-217ENST00000628955 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
PSMA6-217ENST00000628955 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
PSMA6-217ENST00000628955 EIF4G1Q04637 1599 aaKnown RBP25.89■■□□□ 1.73
PSMA6-217ENST00000628955 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
PSMA6-217ENST00000628955 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
PSMA6-217ENST00000628955 BAZ1AQ9NRL2 1556 aaPredicted RBP25.36■■□□□ 1.65
PSMA6-217ENST00000628955 SMARCA4P51532 1647 aa25.34■■□□□ 1.65
PSMA6-217ENST00000628955 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
PSMA6-217ENST00000628955 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
PSMA6-217ENST00000628955 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
PSMA6-217ENST00000628955 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
PSMA6-217ENST00000628955 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
PSMA6-217ENST00000628955 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
PSMA6-217ENST00000628955 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
PSMA6-217ENST00000628955 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
PSMA6-217ENST00000628955 WIZO95785 1651 aa24.85■■□□□ 1.57
PSMA6-217ENST00000628955 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
PSMA6-217ENST00000628955 NESP48681 1621 aa24.66■■□□□ 1.54
PSMA6-217ENST00000628955 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
PSMA6-217ENST00000628955 LAMC3Q9Y6N6 1575 aa24.62■■□□□ 1.53
PSMA6-217ENST00000628955 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
PSMA6-217ENST00000628955 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
PSMA6-217ENST00000628955 CUX2O14529 1486 aa24.43■■□□□ 1.5
PSMA6-217ENST00000628955 CFTRP13569 1480 aa24.39■■□□□ 1.5
PSMA6-217ENST00000628955 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
PSMA6-217ENST00000628955 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
PSMA6-217ENST00000628955 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
PSMA6-217ENST00000628955 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
PSMA6-217ENST00000628955 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
PSMA6-217ENST00000628955 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
PSMA6-217ENST00000628955 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
PSMA6-217ENST00000628955 WDR62O43379 1518 aa24.1■■□□□ 1.45
PSMA6-217ENST00000628955 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
PSMA6-217ENST00000628955 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
PSMA6-217ENST00000628955 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
PSMA6-217ENST00000628955 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
PSMA6-217ENST00000628955 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
PSMA6-217ENST00000628955 DNMBPQ6XZF7 1577 aa23.8■■□□□ 1.4
PSMA6-217ENST00000628955 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
PSMA6-217ENST00000628955 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
PSMA6-217ENST00000628955 SOGA1O94964 1423 aa23.62■■□□□ 1.37
PSMA6-217ENST00000628955 CUX1P39880 1505 aa23.62■■□□□ 1.37
PSMA6-217ENST00000628955 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
PSMA6-217ENST00000628955 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
PSMA6-217ENST00000628955 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
PSMA6-217ENST00000628955 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
PSMA6-217ENST00000628955 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
PSMA6-217ENST00000628955 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
PSMA6-217ENST00000628955 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
PSMA6-217ENST00000628955 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
PSMA6-217ENST00000628955 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
PSMA6-217ENST00000628955 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
PSMA6-217ENST00000628955 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
PSMA6-217ENST00000628955 FBLN2P98095 1184 aa23.36■■□□□ 1.33
PSMA6-217ENST00000628955 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
PSMA6-217ENST00000628955 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
PSMA6-217ENST00000628955 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
PSMA6-217ENST00000628955 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
PSMA6-217ENST00000628955 GAPVD1Q14C86 1478 aa23.32■■□□□ 1.32
PSMA6-217ENST00000628955 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
PSMA6-217ENST00000628955 SNAPC4Q5SXM2 1469 aa23.27■■□□□ 1.32
PSMA6-217ENST00000628955 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
PSMA6-217ENST00000628955 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
PSMA6-217ENST00000628955 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
PSMA6-217ENST00000628955 CHD1O14646 1710 aa23.14■■□□□ 1.3
PSMA6-217ENST00000628955 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
PSMA6-217ENST00000628955 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
PSMA6-217ENST00000628955 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
PSMA6-217ENST00000628955 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
PSMA6-217ENST00000628955 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
PSMA6-217ENST00000628955 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
PSMA6-217ENST00000628955 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
PSMA6-217ENST00000628955 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
PSMA6-217ENST00000628955 IGF1RP08069 1367 aa22.97■■□□□ 1.27
PSMA6-217ENST00000628955 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
PSMA6-217ENST00000628955 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
PSMA6-217ENST00000628955 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
PSMA6-217ENST00000628955 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
PSMA6-217ENST00000628955 CYB5RLQ6IPT4 315 aa22.91■■□□□ 1.26
PSMA6-217ENST00000628955 NUP160Q12769 1436 aa22.9■■□□□ 1.26
PSMA6-217ENST00000628955 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
PSMA6-217ENST00000628955 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
PSMA6-217ENST00000628955 CUL7Q14999 1698 aa22.81■■□□□ 1.24
PSMA6-217ENST00000628955 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
PSMA6-217ENST00000628955 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
PSMA6-217ENST00000628955 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
PSMA6-217ENST00000628955 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms