Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 AC239859.2-201ENST00000444165 318 ntBASIC16.63■□□□□ 0.25
ZNF546Q86UE3 OR2I1P-207ENST00000453522 948 ntBASIC16.63■□□□□ 0.25
ZNF546Q86UE3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 BX005040.4-201ENST00000637145 1518 ntBASIC16.63■□□□□ 0.25
ZNF546Q86UE3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF546Q86UE3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 AC020916.1-201ENST00000587762 1774 ntBASIC16.62■□□□□ 0.25
ZNF546Q86UE3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 AC018470.1-201ENST00000624790 3129 ntBASIC16.62■□□□□ 0.25
ZNF546Q86UE3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF546Q86UE3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 LINC01465-201ENST00000408887 1940 ntBASIC16.61■□□□□ 0.25
ZNF546Q86UE3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 AC006455.2-201ENST00000429931 906 ntBASIC16.61■□□□□ 0.25
ZNF546Q86UE3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF546Q86UE3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF546Q86UE3 AL691432.2-201ENST00000607222 2038 ntBASIC16.6■□□□□ 0.25
ZNF546Q86UE3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms