Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MRPL13-203ENST00000518918 633 ntTSL 212.83□□□□□ -0.362e-7■■■□□ 15.6
SND1Q7KZF4 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.528e-6■■■□□ 15.6
SND1Q7KZF4 MRPL2-204ENST00000470667 765 ntTSL 511.71□□□□□ -0.532e-7■■■□□ 15.6
SND1Q7KZF4 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.561e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-204ENST00000538170 4093 ntTSL 2 BASIC11.47□□□□□ -0.571e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-209ENST00000588910 1389 ntTSL 1 (best) BASIC11.12□□□□□ -0.631e-7■■■□□ 15.6
SND1Q7KZF4 CTBP2-212ENST00000530884 578 ntTSL 310.92□□□□□ -0.668e-6■■■□□ 15.6
SND1Q7KZF4 MAPRE2-205ENST00000585592 622 ntTSL 210.84□□□□□ -0.671e-7■■■□□ 15.6
SND1Q7KZF4 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC10.73□□□□□ -0.691e-7■■■□□ 15.6
SND1Q7KZF4 PSEN2-204ENST00000460775 782 ntTSL 310.66□□□□□ -0.71e-7■■■□□ 15.6
SND1Q7KZF4 ARL6IP5-202ENST00000470936 580 ntTSL 210.53□□□□□ -0.721e-7■■■□□ 15.6
SND1Q7KZF4 PMPCB-208ENST00000498530 1161 ntTSL 210.15□□□□□ -0.781e-7■■■□□ 15.6
SND1Q7KZF4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC9.16□□□□□ -0.941e-7■■■□□ 15.6
SND1Q7KZF4 ANXA2-222ENST00000559559 1076 ntTSL 28.98□□□□□ -0.971e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-208ENST00000588349 543 ntTSL 58.94□□□□□ -0.981e-7■■■□□ 15.6
SND1Q7KZF4 NDUFS2-212ENST00000492153 426 ntTSL 28.13□□□□□ -1.111e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.05□□□□□ -1.121e-7■■■□□ 15.6
SND1Q7KZF4 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.141e-7■■■□□ 15.6
SND1Q7KZF4 PDE11A-205ENST00000433879 1310 ntTSL 57.75□□□□□ -1.171e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-206ENST00000587359 584 ntTSL 57.17□□□□□ -1.261e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-210ENST00000589180 553 ntTSL 57.1□□□□□ -1.271e-7■■■□□ 15.6
SND1Q7KZF4 ANXA2-207ENST00000557906 812 ntTSL 57.08□□□□□ -1.281e-7■■■□□ 15.6
SND1Q7KZF4 PDE11A-211ENST00000497003 3000 ntTSL 1 (best)6.69□□□□□ -1.341e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.411e-7■■■□□ 15.6
SND1Q7KZF4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.421e-7■■■□□ 15.6
SND1Q7KZF4 ANXA2-217ENST00000559113 564 ntTSL 55.73□□□□□ -1.491e-7■■■□□ 15.6
SND1Q7KZF4 ANXA2-231ENST00000560389 594 ntTSL 54.87□□□□□ -1.631e-7■■■□□ 15.6
SND1Q7KZF4 APOA2-208ENST00000481413 927 ntTSL 215.96■□□□□ 0.156e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.24■□□□□ 0.036e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-209ENST00000481511 655 ntTSL 512.97□□□□□ -0.336e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-203ENST00000463812 401 ntTSL 2 BASIC9.68□□□□□ -0.866e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-202ENST00000463273 469 ntTSL 1 (best)9.3□□□□□ -0.926e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.1□□□□□ -1.436e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.476e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.03□□□□□ -1.66e-48■■■□□ 15.5
SND1Q7KZF4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.91□□□□□ -1.786e-48■■■□□ 15.5
SND1Q7KZF4 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.841e-6■■■□□ 15.5
SND1Q7KZF4 ITM2A-205ENST00000469541 879 ntTSL 29.04□□□□□ -0.961e-6■■■□□ 15.5
SND1Q7KZF4 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC8.48□□□□□ -1.051e-6■■■□□ 15.5
SND1Q7KZF4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.622e-6■■■□□ 15.5
SND1Q7KZF4 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.092e-6■■■□□ 15.5
SND1Q7KZF4 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.632e-6■■■□□ 15.5
SND1Q7KZF4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.281e-6■■■□□ 15.5
SND1Q7KZF4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20■□□□□ 0.791e-6■■■□□ 15.5
SND1Q7KZF4 P4HB-214ENST00000570907 353 ntTSL 36.35□□□□□ -1.391e-23■■■□□ 15.5
SND1Q7KZF4 SGSH-216ENST00000576856 818 ntTSL 315.32■□□□□ 0.041e-12■■■□□ 15.5
SND1Q7KZF4 HM13-218ENST00000487281 757 ntTSL 315.95■□□□□ 0.142e-19■■■□□ 15.5
SND1Q7KZF4 HM13-221ENST00000493364 372 ntTSL 211.91□□□□□ -0.52e-19■■■□□ 15.5
SND1Q7KZF4 CP-203ENST00000460674 2269 ntTSL 1 (best)10.39□□□□□ -0.757e-10■■■□□ 15.5
SND1Q7KZF4 CP-209ENST00000479771 1150 ntTSL 56.45□□□□□ -1.387e-10■■■□□ 15.5
SND1Q7KZF4 VCL-205ENST00000478896 727 ntTSL 513.7□□□□□ -0.223e-6■■■□□ 15.5
SND1Q7KZF4 CDH2-204ENST00000418492 740 ntTSL 57.65□□□□□ -1.184e-8■■■□□ 15.5
SND1Q7KZF4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.422e-7■■■□□ 15.5
SND1Q7KZF4 DNAJB9-202ENST00000465725 343 ntTSL 24.6□□□□□ -1.672e-7■■■□□ 15.5
SND1Q7KZF4 SLC19A1-206ENST00000460174 600 ntTSL 314.39□□□□□ -0.118e-14■■■□□ 15.5
SND1Q7KZF4 FXYD5-208ENST00000543307 1003 ntTSL 2 BASIC11.07□□□□□ -0.643e-12■■■□□ 15.5
SND1Q7KZF4 CLIC2-203ENST00000465553 902 ntTSL 37.47□□□□□ -1.214e-6■■■□□ 15.5
SND1Q7KZF4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.784e-6■■■□□ 15.5
SND1Q7KZF4 SOD1-203ENST00000470944 1746 ntTSL 229.99■■■□□ 2.399e-14■■■□□ 15.5
SND1Q7KZF4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.119e-14■■■□□ 15.5
SND1Q7KZF4 SOD1-202ENST00000389995 865 ntTSL 3 BASIC12.24□□□□□ -0.459e-14■■■□□ 15.5
SND1Q7KZF4 VIM-210ENST00000637053 508 ntTSL 24.07□□□□□ -1.761e-29■■■□□ 15.5
SND1Q7KZF4 CTSB-216ENST00000530290 498 ntTSL 35.85□□□□□ -1.472e-14■■■□□ 15.5
SND1Q7KZF4 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.331e-7■■■□□ 15.5
SND1Q7KZF4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.331e-7■■■□□ 15.5
SND1Q7KZF4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.541e-7■■■□□ 15.5
SND1Q7KZF4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.563e-9■■■□□ 15.5
SND1Q7KZF4 ERGIC3-216ENST00000488384 766 ntTSL 216.56■□□□□ 0.244e-8■■■□□ 15.5
SND1Q7KZF4 ERGIC3-217ENST00000488935 389 ntTSL 216.38■□□□□ 0.214e-8■■■□□ 15.5
SND1Q7KZF4 C2-202ENST00000383177 1847 ntTSL 516.63■□□□□ 0.251e-10■■■□□ 15.5
SND1Q7KZF4 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.43■□□□□ 0.061e-10■■■□□ 15.5
SND1Q7KZF4 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.76□□□□□ -0.051e-10■■■□□ 15.5
SND1Q7KZF4 C2-212ENST00000482060 2335 ntTSL 214.4□□□□□ -0.11e-10■■■□□ 15.5
SND1Q7KZF4 C2-211ENST00000469372 1906 ntTSL 2 BASIC13.46□□□□□ -0.251e-10■■■□□ 15.5
SND1Q7KZF4 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.771e-10■■■□□ 15.5
SND1Q7KZF4 SLC38A2-207ENST00000548870 576 ntTSL 26.91□□□□□ -1.32e-21■■■□□ 15.5
SND1Q7KZF4 TF-210ENST00000482271 659 ntTSL 419.57■□□□□ 0.729e-20■■■□□ 15.5
SND1Q7KZF4 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)15.1■□□□□ 0.012e-11■■■□□ 15.5
SND1Q7KZF4 CNIH4-208ENST00000477413 820 ntTSL 523.3■■□□□ 1.322e-17■■■□□ 15.5
SND1Q7KZF4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.02■□□□□ 0.962e-17■■■□□ 15.5
SND1Q7KZF4 CNIH4-206ENST00000468318 1525 ntTSL 218.88■□□□□ 0.612e-17■■■□□ 15.5
SND1Q7KZF4 CNIH4-204ENST00000366860 912 ntTSL 316.32■□□□□ 0.22e-17■■■□□ 15.5
SND1Q7KZF4 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC9.66□□□□□ -0.862e-17■■■□□ 15.5
SND1Q7KZF4 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.972e-17■■■□□ 15.5
SND1Q7KZF4 GYPB-212ENST00000511198 444 ntTSL 1 (best)8.57□□□□□ -1.045e-6■■■□□ 15.5
SND1Q7KZF4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.172e-17■■■□□ 15.5
SND1Q7KZF4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.62□□□□□ -1.195e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-206ENST00000506516 473 ntTSL 1 (best)7.56□□□□□ -1.25e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-214ENST00000513557 277 ntTSL 1 (best)6.9□□□□□ -1.35e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-215ENST00000513677 221 ntTSL 1 (best)6.86□□□□□ -1.315e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-203ENST00000503255 486 ntTSL 1 (best)6.52□□□□□ -1.375e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-204ENST00000504951 632 ntTSL 1 (best)6.26□□□□□ -1.415e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-205ENST00000505583 583 ntTSL 1 (best)6.03□□□□□ -1.445e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-208ENST00000507009 388 ntTSL 1 (best)5.97□□□□□ -1.455e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-207ENST00000506679 606 ntTSL 1 (best)5.37□□□□□ -1.555e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.25□□□□□ -1.575e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.12□□□□□ -1.595e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.595e-6■■■□□ 15.5
SND1Q7KZF4 GYPB-211ENST00000510196 508 ntTSL 1 (best)3.9□□□□□ -1.795e-6■■■□□ 15.5
SND1Q7KZF4 TALDO1-202ENST00000528070 856 ntTSL 518.6■□□□□ 0.571e-15■■■□□ 15.5
Retrieved 100 of 13,567 protein–RNA pairs in 139.5 ms