RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
GYPB-203ENST00000503255 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
GYPB-203ENST00000503255 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
GYPB-203ENST00000503255 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
GYPB-203ENST00000503255 FOXD1Q16676 465 aa21.31■■□□□ 1
GYPB-203ENST00000503255 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
GYPB-203ENST00000503255 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
GYPB-203ENST00000503255 ADRA2BP18089 450 aa19.99■□□□□ 0.79
GYPB-203ENST00000503255 PIAS4Q8N2W9 510 aaPredicted RBP19.9■□□□□ 0.78
GYPB-203ENST00000503255 MSH5O43196 834 aa19.77■□□□□ 0.76
GYPB-203ENST00000503255 POTEDQ86YR6 584 aa19.33■□□□□ 0.68
GYPB-203ENST00000503255 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
GYPB-203ENST00000503255 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
GYPB-203ENST00000503255 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
GYPB-203ENST00000503255 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
GYPB-203ENST00000503255 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
GYPB-203ENST00000503255 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
GYPB-203ENST00000503255 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
GYPB-203ENST00000503255 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
GYPB-203ENST00000503255 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
GYPB-203ENST00000503255 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
GYPB-203ENST00000503255 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
GYPB-203ENST00000503255 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
GYPB-203ENST00000503255 KCNA4P22459 653 aa16.77■□□□□ 0.28
GYPB-203ENST00000503255 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
GYPB-203ENST00000503255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
GYPB-203ENST00000503255 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
GYPB-203ENST00000503255 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
GYPB-203ENST00000503255 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
GYPB-203ENST00000503255 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
GYPB-203ENST00000503255 CAPN15O75808 1086 aa16.05■□□□□ 0.16
GYPB-203ENST00000503255 DSG3P32926 999 aa15.92■□□□□ 0.14
GYPB-203ENST00000503255 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
GYPB-203ENST00000503255 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
GYPB-203ENST00000503255 ABCB7O75027 752 aa15.75■□□□□ 0.11
GYPB-203ENST00000503255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
GYPB-203ENST00000503255 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
GYPB-203ENST00000503255 APLP2Q06481 763 aa15.68■□□□□ 0.1
GYPB-203ENST00000503255 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
GYPB-203ENST00000503255 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
GYPB-203ENST00000503255 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
GYPB-203ENST00000503255 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
GYPB-203ENST00000503255 ZBTB22O15209 634 aa15.46■□□□□ 0.07
GYPB-203ENST00000503255 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
GYPB-203ENST00000503255 POLA2Q14181 598 aa15.42■□□□□ 0.06
GYPB-203ENST00000503255 POTEHQ6S545 545 aa15.14■□□□□ 0.01
GYPB-203ENST00000503255 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
GYPB-203ENST00000503255 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
GYPB-203ENST00000503255 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
GYPB-203ENST00000503255 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
GYPB-203ENST00000503255 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
GYPB-203ENST00000503255 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
GYPB-203ENST00000503255 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
GYPB-203ENST00000503255 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
GYPB-203ENST00000503255 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
GYPB-203ENST00000503255 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
GYPB-203ENST00000503255 FBLN2P98095 1184 aa14.66□□□□□ -0.06
GYPB-203ENST00000503255 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
GYPB-203ENST00000503255 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
GYPB-203ENST00000503255 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
GYPB-203ENST00000503255 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
GYPB-203ENST00000503255 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
GYPB-203ENST00000503255 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
GYPB-203ENST00000503255 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
GYPB-203ENST00000503255 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
GYPB-203ENST00000503255 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
GYPB-203ENST00000503255 SPDYE1Q8NFV5 336 aaPredicted RBP14.27□□□□□ -0.13
GYPB-203ENST00000503255 HAX1O00165 279 aa14.26□□□□□ -0.13
GYPB-203ENST00000503255 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
GYPB-203ENST00000503255 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
GYPB-203ENST00000503255 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
GYPB-203ENST00000503255 EVX2Q03828 476 aa14.17□□□□□ -0.14
GYPB-203ENST00000503255 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
GYPB-203ENST00000503255 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
GYPB-203ENST00000503255 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
GYPB-203ENST00000503255 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
GYPB-203ENST00000503255 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
GYPB-203ENST00000503255 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
GYPB-203ENST00000503255 GABBR2O75899 941 aa13.76□□□□□ -0.21
GYPB-203ENST00000503255 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
GYPB-203ENST00000503255 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
GYPB-203ENST00000503255 PROM2Q8N271 834 aa13.58□□□□□ -0.24
GYPB-203ENST00000503255 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
GYPB-203ENST00000503255 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
GYPB-203ENST00000503255 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
GYPB-203ENST00000503255 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
GYPB-203ENST00000503255 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
GYPB-203ENST00000503255 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
GYPB-203ENST00000503255 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
GYPB-203ENST00000503255 FKBP8Q14318 412 aa13.39□□□□□ -0.27
GYPB-203ENST00000503255 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
GYPB-203ENST00000503255 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
GYPB-203ENST00000503255 MIER1Q8N108 512 aa13.36□□□□□ -0.27
GYPB-203ENST00000503255 LHX8Q68G74 356 aa13.35□□□□□ -0.27
GYPB-203ENST00000503255 CLCN6P51797 869 aa13.34□□□□□ -0.27
GYPB-203ENST00000503255 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
GYPB-203ENST00000503255 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
GYPB-203ENST00000503255 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
GYPB-203ENST00000503255 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
GYPB-203ENST00000503255 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms