RNA–Protein interactions for RNA: ENST00000460775.5

PSEN2-204, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-204ENST00000460775 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
PSEN2-204ENST00000460775 ABCC9O60706 1549 aa22.28■■□□□ 1.16
PSEN2-204ENST00000460775 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
PSEN2-204ENST00000460775 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
PSEN2-204ENST00000460775 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
PSEN2-204ENST00000460775 NACADO15069 1562 aa20.95■□□□□ 0.94
PSEN2-204ENST00000460775 DCAF8L2P0C7V8 631 aa20.82■□□□□ 0.92
PSEN2-204ENST00000460775 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
PSEN2-204ENST00000460775 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
PSEN2-204ENST00000460775 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
PSEN2-204ENST00000460775 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
PSEN2-204ENST00000460775 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
PSEN2-204ENST00000460775 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
PSEN2-204ENST00000460775 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
PSEN2-204ENST00000460775 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
PSEN2-204ENST00000460775 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
PSEN2-204ENST00000460775 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
PSEN2-204ENST00000460775 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
PSEN2-204ENST00000460775 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
PSEN2-204ENST00000460775 CUX2O14529 1486 aa19.43■□□□□ 0.7
PSEN2-204ENST00000460775 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
PSEN2-204ENST00000460775 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
PSEN2-204ENST00000460775 BAZ1AQ9NRL2 1556 aaPredicted RBP19.24■□□□□ 0.67
PSEN2-204ENST00000460775 ATAD2BQ9ULI0 1458 aa19.24■□□□□ 0.67
PSEN2-204ENST00000460775 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
PSEN2-204ENST00000460775 HMGXB3Q12766 1538 aa19.18■□□□□ 0.66
PSEN2-204ENST00000460775 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
PSEN2-204ENST00000460775 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
PSEN2-204ENST00000460775 NESP48681 1621 aa19.08■□□□□ 0.65
PSEN2-204ENST00000460775 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
PSEN2-204ENST00000460775 WIZO95785 1651 aa19.01■□□□□ 0.63
PSEN2-204ENST00000460775 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
PSEN2-204ENST00000460775 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
PSEN2-204ENST00000460775 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
PSEN2-204ENST00000460775 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
PSEN2-204ENST00000460775 PDS5BQ9NTI5 1447 aa18.82■□□□□ 0.6
PSEN2-204ENST00000460775 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
PSEN2-204ENST00000460775 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
PSEN2-204ENST00000460775 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
PSEN2-204ENST00000460775 WDR62O43379 1518 aa18.68■□□□□ 0.58
PSEN2-204ENST00000460775 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
PSEN2-204ENST00000460775 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
PSEN2-204ENST00000460775 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
PSEN2-204ENST00000460775 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
PSEN2-204ENST00000460775 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
PSEN2-204ENST00000460775 CFTRP13569 1480 aa18.49■□□□□ 0.55
PSEN2-204ENST00000460775 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
PSEN2-204ENST00000460775 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
PSEN2-204ENST00000460775 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
PSEN2-204ENST00000460775 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
PSEN2-204ENST00000460775 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
PSEN2-204ENST00000460775 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
PSEN2-204ENST00000460775 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
PSEN2-204ENST00000460775 IFT140Q96RY7 1462 aa18.19■□□□□ 0.5
PSEN2-204ENST00000460775 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
PSEN2-204ENST00000460775 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
PSEN2-204ENST00000460775 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
PSEN2-204ENST00000460775 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
PSEN2-204ENST00000460775 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
PSEN2-204ENST00000460775 EIF4G3O43432 1585 aaKnown RBP18.03■□□□□ 0.48
PSEN2-204ENST00000460775 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
PSEN2-204ENST00000460775 CUX1P39880 1505 aa17.98■□□□□ 0.47
PSEN2-204ENST00000460775 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
PSEN2-204ENST00000460775 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
PSEN2-204ENST00000460775 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
PSEN2-204ENST00000460775 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
PSEN2-204ENST00000460775 CHD1O14646 1710 aa17.91■□□□□ 0.46
PSEN2-204ENST00000460775 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
PSEN2-204ENST00000460775 SOGA1O94964 1423 aa17.88■□□□□ 0.45
PSEN2-204ENST00000460775 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
PSEN2-204ENST00000460775 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
PSEN2-204ENST00000460775 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
PSEN2-204ENST00000460775 TOP2BQ02880 1626 aa17.83■□□□□ 0.45
PSEN2-204ENST00000460775 SYNJ1O43426 1573 aa17.83■□□□□ 0.45
PSEN2-204ENST00000460775 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
PSEN2-204ENST00000460775 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
PSEN2-204ENST00000460775 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
PSEN2-204ENST00000460775 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
PSEN2-204ENST00000460775 FBLN2P98095 1184 aa17.76■□□□□ 0.43
PSEN2-204ENST00000460775 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
PSEN2-204ENST00000460775 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
PSEN2-204ENST00000460775 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
PSEN2-204ENST00000460775 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
PSEN2-204ENST00000460775 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
PSEN2-204ENST00000460775 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
PSEN2-204ENST00000460775 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
PSEN2-204ENST00000460775 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
PSEN2-204ENST00000460775 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
PSEN2-204ENST00000460775 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
PSEN2-204ENST00000460775 NUP160Q12769 1436 aa17.48■□□□□ 0.39
PSEN2-204ENST00000460775 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
PSEN2-204ENST00000460775 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
PSEN2-204ENST00000460775 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
PSEN2-204ENST00000460775 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
PSEN2-204ENST00000460775 IGF1RP08069 1367 aa17.45■□□□□ 0.38
PSEN2-204ENST00000460775 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
PSEN2-204ENST00000460775 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
PSEN2-204ENST00000460775 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
PSEN2-204ENST00000460775 SHROOM2Q13796 1616 aa17.42■□□□□ 0.38
PSEN2-204ENST00000460775 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms