RNA–Protein interactions for RNA: ENST00000418492.5

CDH2-204, Transcript of cadherin 2, humanhuman

TSL 5

Gene CDH2, Length 740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-204ENST00000418492 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
CDH2-204ENST00000418492 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
CDH2-204ENST00000418492 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
CDH2-204ENST00000418492 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
CDH2-204ENST00000418492 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
CDH2-204ENST00000418492 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
CDH2-204ENST00000418492 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
CDH2-204ENST00000418492 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
CDH2-204ENST00000418492 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
CDH2-204ENST00000418492 NACADO15069 1562 aa13.86□□□□□ -0.19
CDH2-204ENST00000418492 ABCC9O60706 1549 aa13.84□□□□□ -0.19
CDH2-204ENST00000418492 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
CDH2-204ENST00000418492 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
CDH2-204ENST00000418492 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
CDH2-204ENST00000418492 SCRIBQ14160 1630 aa13.35□□□□□ -0.27
CDH2-204ENST00000418492 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
CDH2-204ENST00000418492 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
CDH2-204ENST00000418492 FOXD1Q16676 465 aa13.17□□□□□ -0.3
CDH2-204ENST00000418492 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
CDH2-204ENST00000418492 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
CDH2-204ENST00000418492 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
CDH2-204ENST00000418492 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH2-204ENST00000418492 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
CDH2-204ENST00000418492 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
CDH2-204ENST00000418492 PEG3Q9GZU2 1588 aa12.94□□□□□ -0.34
CDH2-204ENST00000418492 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
CDH2-204ENST00000418492 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
CDH2-204ENST00000418492 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
CDH2-204ENST00000418492 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
CDH2-204ENST00000418492 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
CDH2-204ENST00000418492 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
CDH2-204ENST00000418492 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
CDH2-204ENST00000418492 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
CDH2-204ENST00000418492 WIZO95785 1651 aa12.76□□□□□ -0.37
CDH2-204ENST00000418492 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
CDH2-204ENST00000418492 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
CDH2-204ENST00000418492 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
CDH2-204ENST00000418492 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
CDH2-204ENST00000418492 MSH5O43196 834 aa12.49□□□□□ -0.41
CDH2-204ENST00000418492 CFTRP13569 1480 aa12.44□□□□□ -0.42
CDH2-204ENST00000418492 PPP6R1Q9UPN7 881 aa12.43□□□□□ -0.42
CDH2-204ENST00000418492 ADRA2BP18089 450 aa12.42□□□□□ -0.42
CDH2-204ENST00000418492 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
CDH2-204ENST00000418492 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
CDH2-204ENST00000418492 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
CDH2-204ENST00000418492 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
CDH2-204ENST00000418492 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
CDH2-204ENST00000418492 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
CDH2-204ENST00000418492 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
CDH2-204ENST00000418492 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
CDH2-204ENST00000418492 ABCC8Q09428 1581 aa12.23□□□□□ -0.45
CDH2-204ENST00000418492 EEA1Q15075 1411 aa12.2□□□□□ -0.46
CDH2-204ENST00000418492 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
CDH2-204ENST00000418492 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
CDH2-204ENST00000418492 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
CDH2-204ENST00000418492 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
CDH2-204ENST00000418492 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
CDH2-204ENST00000418492 NESP48681 1621 aa12.11□□□□□ -0.47
CDH2-204ENST00000418492 CUX1P39880 1505 aa12.11□□□□□ -0.47
CDH2-204ENST00000418492 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
CDH2-204ENST00000418492 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
CDH2-204ENST00000418492 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
CDH2-204ENST00000418492 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
CDH2-204ENST00000418492 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
CDH2-204ENST00000418492 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
CDH2-204ENST00000418492 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
CDH2-204ENST00000418492 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
CDH2-204ENST00000418492 WDR62O43379 1518 aa11.99□□□□□ -0.49
CDH2-204ENST00000418492 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
CDH2-204ENST00000418492 WDR97A6NE52 1622 aa11.98□□□□□ -0.49
CDH2-204ENST00000418492 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
CDH2-204ENST00000418492 SOGA1O94964 1423 aa11.96□□□□□ -0.49
CDH2-204ENST00000418492 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
CDH2-204ENST00000418492 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
CDH2-204ENST00000418492 KIF21BO75037 1637 aa11.92□□□□□ -0.5
CDH2-204ENST00000418492 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
CDH2-204ENST00000418492 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
CDH2-204ENST00000418492 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
CDH2-204ENST00000418492 IGF1RP08069 1367 aa11.89□□□□□ -0.51
CDH2-204ENST00000418492 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
CDH2-204ENST00000418492 CUX2O14529 1486 aa11.89□□□□□ -0.51
CDH2-204ENST00000418492 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
CDH2-204ENST00000418492 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
CDH2-204ENST00000418492 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
CDH2-204ENST00000418492 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
CDH2-204ENST00000418492 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
CDH2-204ENST00000418492 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
CDH2-204ENST00000418492 CUL7Q14999 1698 aa11.82□□□□□ -0.52
CDH2-204ENST00000418492 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
CDH2-204ENST00000418492 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
CDH2-204ENST00000418492 RAPGEF2Q9Y4G8 1499 aa11.8□□□□□ -0.52
CDH2-204ENST00000418492 GRIN2BQ13224 1484 aa11.79□□□□□ -0.52
CDH2-204ENST00000418492 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
CDH2-204ENST00000418492 TDRD9Q8NDG6 1382 aaKnown RBP11.76□□□□□ -0.53
CDH2-204ENST00000418492 FHAD1B1AJZ9 1412 aa11.76□□□□□ -0.53
CDH2-204ENST00000418492 MAGI1Q96QZ7 1491 aaPredicted RBP11.74□□□□□ -0.53
CDH2-204ENST00000418492 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
CDH2-204ENST00000418492 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDH2-204ENST00000418492 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
CDH2-204ENST00000418492 PBRM1Q86U86 1689 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms