RNA–Protein interactions for RNA: ENST00000465553.5

CLIC2-203, Transcript of chloride intracellular channel 2, humanhuman

TSL 3

Gene CLIC2, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC2-203ENST00000465553 AEBP2Q6ZN18 517 aaPredicted RBP30.58■■■□□ 2.49
CLIC2-203ENST00000465553 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
CLIC2-203ENST00000465553 SENP3Q9H4L4 574 aaPredicted RBP26.09■■□□□ 1.77
CLIC2-203ENST00000465553 PHF23Q9BUL5 403 aaPredicted RBP25.72■■□□□ 1.71
CLIC2-203ENST00000465553 FOXD1Q16676 465 aa24.45■■□□□ 1.5
CLIC2-203ENST00000465553 POTEDQ86YR6 584 aa23.46■■□□□ 1.35
CLIC2-203ENST00000465553 MSH5O43196 834 aa23.03■■□□□ 1.28
CLIC2-203ENST00000465553 PIAS4Q8N2W9 510 aaPredicted RBP22.65■■□□□ 1.22
CLIC2-203ENST00000465553 PLPPR3Q6T4P5 718 aa22.47■■□□□ 1.19
CLIC2-203ENST00000465553 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
CLIC2-203ENST00000465553 ADRA2BP18089 450 aa22.33■■□□□ 1.17
CLIC2-203ENST00000465553 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
CLIC2-203ENST00000465553 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
CLIC2-203ENST00000465553 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
CLIC2-203ENST00000465553 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
CLIC2-203ENST00000465553 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
CLIC2-203ENST00000465553 HOXD11P31277 338 aaPredicted RBP19.67■□□□□ 0.74
CLIC2-203ENST00000465553 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
CLIC2-203ENST00000465553 RNF39Q9H2S5 420 aa19.64■□□□□ 0.73
CLIC2-203ENST00000465553 CNKSR2Q8WXI2 1034 aa19.38■□□□□ 0.69
CLIC2-203ENST00000465553 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
CLIC2-203ENST00000465553 C1QBPQ07021 282 aaKnown RBP19.3■□□□□ 0.68
CLIC2-203ENST00000465553 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
CLIC2-203ENST00000465553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLIC2-203ENST00000465553 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
CLIC2-203ENST00000465553 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
CLIC2-203ENST00000465553 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
CLIC2-203ENST00000465553 POTEHQ6S545 545 aa18.26■□□□□ 0.51
CLIC2-203ENST00000465553 DSG3P32926 999 aa18.21■□□□□ 0.51
CLIC2-203ENST00000465553 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
CLIC2-203ENST00000465553 CAPN15O75808 1086 aa18.14■□□□□ 0.49
CLIC2-203ENST00000465553 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
CLIC2-203ENST00000465553 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
CLIC2-203ENST00000465553 ABCB7O75027 752 aa17.69■□□□□ 0.42
CLIC2-203ENST00000465553 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
CLIC2-203ENST00000465553 KCNA4P22459 653 aa17.62■□□□□ 0.41
CLIC2-203ENST00000465553 APLP2Q06481 763 aa17.62■□□□□ 0.41
CLIC2-203ENST00000465553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
CLIC2-203ENST00000465553 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
CLIC2-203ENST00000465553 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
CLIC2-203ENST00000465553 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
CLIC2-203ENST00000465553 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
CLIC2-203ENST00000465553 POLA2Q14181 598 aa17.15■□□□□ 0.34
CLIC2-203ENST00000465553 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
CLIC2-203ENST00000465553 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
CLIC2-203ENST00000465553 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
CLIC2-203ENST00000465553 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
CLIC2-203ENST00000465553 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
CLIC2-203ENST00000465553 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
CLIC2-203ENST00000465553 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
CLIC2-203ENST00000465553 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
CLIC2-203ENST00000465553 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
CLIC2-203ENST00000465553 PITPNM1O00562 1244 aa16.53■□□□□ 0.24
CLIC2-203ENST00000465553 HAX1O00165 279 aa16.52■□□□□ 0.24
CLIC2-203ENST00000465553 FXR2P51116 673 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLIC2-203ENST00000465553 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
CLIC2-203ENST00000465553 EVX2Q03828 476 aa16.34■□□□□ 0.21
CLIC2-203ENST00000465553 ZBTB22O15209 634 aa16.22■□□□□ 0.19
CLIC2-203ENST00000465553 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
CLIC2-203ENST00000465553 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
CLIC2-203ENST00000465553 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
CLIC2-203ENST00000465553 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
CLIC2-203ENST00000465553 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
CLIC2-203ENST00000465553 FBLN2P98095 1184 aa16.06■□□□□ 0.16
CLIC2-203ENST00000465553 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
CLIC2-203ENST00000465553 C19orf67A6NJJ6 358 aa16.01■□□□□ 0.15
CLIC2-203ENST00000465553 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
CLIC2-203ENST00000465553 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
CLIC2-203ENST00000465553 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
CLIC2-203ENST00000465553 GABBR2O75899 941 aa15.91■□□□□ 0.14
CLIC2-203ENST00000465553 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
CLIC2-203ENST00000465553 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
CLIC2-203ENST00000465553 LHX8Q68G74 356 aa15.8■□□□□ 0.12
CLIC2-203ENST00000465553 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
CLIC2-203ENST00000465553 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLIC2-203ENST00000465553 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
CLIC2-203ENST00000465553 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
CLIC2-203ENST00000465553 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
CLIC2-203ENST00000465553 CLCN6P51797 869 aa15.42■□□□□ 0.06
CLIC2-203ENST00000465553 DCBLD2Q96PD2 775 aa15.31■□□□□ 0.04
CLIC2-203ENST00000465553 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
CLIC2-203ENST00000465553 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
CLIC2-203ENST00000465553 PLSCR2Q9NRY7 297 aa15.21■□□□□ 0.03
CLIC2-203ENST00000465553 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
CLIC2-203ENST00000465553 GALR2O43603 387 aaPredicted RBP15.14■□□□□ 0.01
CLIC2-203ENST00000465553 OTUD5Q96G74 571 aa15.11■□□□□ 0.01
CLIC2-203ENST00000465553 POTEB2H3BUK9 544 aa15.08■□□□□ 0
CLIC2-203ENST00000465553 STAG3Q9UJ98 1225 aa15.08■□□□□ 0
CLIC2-203ENST00000465553 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
CLIC2-203ENST00000465553 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
CLIC2-203ENST00000465553 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
CLIC2-203ENST00000465553 PELP1Q8IZL8 1130 aaKnown RBP14.94□□□□□ -0.02
CLIC2-203ENST00000465553 POTEMA6NI47 508 aa14.9□□□□□ -0.02
CLIC2-203ENST00000465553 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
CLIC2-203ENST00000465553 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
CLIC2-203ENST00000465553 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
CLIC2-203ENST00000465553 POTEGQ6S5H5 508 aa14.84□□□□□ -0.03
CLIC2-203ENST00000465553 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
CLIC2-203ENST00000465553 POTEJP0CG39 1038 aa14.78□□□□□ -0.04
CLIC2-203ENST00000465553 MS4A3Q96HJ5 214 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms