RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 AEBP2Q6ZN18 517 aaPredicted RBP25.88■■□□□ 1.73
PMPCB-208ENST00000498530 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
PMPCB-208ENST00000498530 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
PMPCB-208ENST00000498530 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
PMPCB-208ENST00000498530 FOXD1Q16676 465 aa20.68■□□□□ 0.9
PMPCB-208ENST00000498530 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
PMPCB-208ENST00000498530 MSH5O43196 834 aa19.49■□□□□ 0.71
PMPCB-208ENST00000498530 PIAS4Q8N2W9 510 aaPredicted RBP19.19■□□□□ 0.66
PMPCB-208ENST00000498530 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
PMPCB-208ENST00000498530 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
PMPCB-208ENST00000498530 ADRA2BP18089 450 aa18.89■□□□□ 0.61
PMPCB-208ENST00000498530 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
PMPCB-208ENST00000498530 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
PMPCB-208ENST00000498530 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
PMPCB-208ENST00000498530 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
PMPCB-208ENST00000498530 KCNA4P22459 653 aa16.84■□□□□ 0.29
PMPCB-208ENST00000498530 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
PMPCB-208ENST00000498530 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
PMPCB-208ENST00000498530 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
PMPCB-208ENST00000498530 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
PMPCB-208ENST00000498530 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
PMPCB-208ENST00000498530 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
PMPCB-208ENST00000498530 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
PMPCB-208ENST00000498530 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
PMPCB-208ENST00000498530 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
PMPCB-208ENST00000498530 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
PMPCB-208ENST00000498530 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
PMPCB-208ENST00000498530 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
PMPCB-208ENST00000498530 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
PMPCB-208ENST00000498530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.123e-9■■□□□ 11.8
PMPCB-208ENST00000498530 ZBTB22O15209 634 aa15.54■□□□□ 0.08
PMPCB-208ENST00000498530 U3KPZ7 1027 aaPredicted RBP15.49■□□□□ 0.07
PMPCB-208ENST00000498530 POTEHQ6S545 545 aa15.45■□□□□ 0.06
PMPCB-208ENST00000498530 DSG3P32926 999 aa15.41■□□□□ 0.06
PMPCB-208ENST00000498530 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
PMPCB-208ENST00000498530 CAPN15O75808 1086 aa15.36■□□□□ 0.05
PMPCB-208ENST00000498530 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
PMPCB-208ENST00000498530 SLC4A2P04920 1241 aa15.07■□□□□ 0
PMPCB-208ENST00000498530 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
PMPCB-208ENST00000498530 ABCB7O75027 752 aa14.99□□□□□ -0.01
PMPCB-208ENST00000498530 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
PMPCB-208ENST00000498530 APLP2Q06481 763 aa14.94□□□□□ -0.02
PMPCB-208ENST00000498530 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
PMPCB-208ENST00000498530 SLC24A1O60721 1099 aa14.87□□□□□ -0.03
PMPCB-208ENST00000498530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
PMPCB-208ENST00000498530 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
PMPCB-208ENST00000498530 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
PMPCB-208ENST00000498530 ATXN8OSP0DMR3 200 aa14.74□□□□□ -0.05
PMPCB-208ENST00000498530 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
PMPCB-208ENST00000498530 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
PMPCB-208ENST00000498530 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
PMPCB-208ENST00000498530 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
PMPCB-208ENST00000498530 FKBP8Q14318 412 aa14.52□□□□□ -0.09
PMPCB-208ENST00000498530 POLA2Q14181 598 aa14.5□□□□□ -0.09
PMPCB-208ENST00000498530 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
PMPCB-208ENST00000498530 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
PMPCB-208ENST00000498530 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
PMPCB-208ENST00000498530 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
PMPCB-208ENST00000498530 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
PMPCB-208ENST00000498530 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
PMPCB-208ENST00000498530 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
PMPCB-208ENST00000498530 PITPNM1O00562 1244 aa14□□□□□ -0.17
PMPCB-208ENST00000498530 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.17
PMPCB-208ENST00000498530 HAX1O00165 279 aa13.96□□□□□ -0.17
PMPCB-208ENST00000498530 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
PMPCB-208ENST00000498530 EVX2Q03828 476 aa13.81□□□□□ -0.2
PMPCB-208ENST00000498530 PROM2Q8N271 834 aa13.73□□□□□ -0.21
PMPCB-208ENST00000498530 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
PMPCB-208ENST00000498530 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
PMPCB-208ENST00000498530 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
PMPCB-208ENST00000498530 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
PMPCB-208ENST00000498530 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
PMPCB-208ENST00000498530 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
PMPCB-208ENST00000498530 FBLN2P98095 1184 aa13.61□□□□□ -0.23
PMPCB-208ENST00000498530 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
PMPCB-208ENST00000498530 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
PMPCB-208ENST00000498530 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
PMPCB-208ENST00000498530 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
PMPCB-208ENST00000498530 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
PMPCB-208ENST00000498530 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
PMPCB-208ENST00000498530 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
PMPCB-208ENST00000498530 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
PMPCB-208ENST00000498530 GABBR2O75899 941 aa13.44□□□□□ -0.26
PMPCB-208ENST00000498530 HAP1P54257 671 aaPredicted RBP13.4□□□□□ -0.26
PMPCB-208ENST00000498530 PKD2Q13563 968 aa13.39□□□□□ -0.27
PMPCB-208ENST00000498530 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
PMPCB-208ENST00000498530 LHX8Q68G74 356 aa13.36□□□□□ -0.27
PMPCB-208ENST00000498530 BCANQ96GW7 911 aa13.34□□□□□ -0.27
PMPCB-208ENST00000498530 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
PMPCB-208ENST00000498530 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
PMPCB-208ENST00000498530 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
PMPCB-208ENST00000498530 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
PMPCB-208ENST00000498530 POTEIP0CG38 1075 aa13.19□□□□□ -0.3
PMPCB-208ENST00000498530 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
PMPCB-208ENST00000498530 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
PMPCB-208ENST00000498530 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
PMPCB-208ENST00000498530 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
PMPCB-208ENST00000498530 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
PMPCB-208ENST00000498530 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
PMPCB-208ENST00000498530 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms