Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PACSIN2-207ENST00000422336 664 ntTSL 510.38□□□□□ -0.752e-7■■□□□ 11.4
PRPF8Q6P2Q9 PCYT2-211ENST00000572924 732 ntTSL 212.63□□□□□ -0.395e-12■■□□□ 11.4
PRPF8Q6P2Q9 GDF15-203ENST00000595973 890 ntTSL 516.44■□□□□ 0.222e-12■■□□□ 11.4
PRPF8Q6P2Q9 GDF15-204ENST00000597765 562 ntTSL 411.97□□□□□ -0.492e-12■■□□□ 11.4
PRPF8Q6P2Q9 GDF15-205ENST00000604609 506 ntTSL 37.97□□□□□ -1.132e-12■■□□□ 11.4
PRPF8Q6P2Q9 SEC13-207ENST00000397105 883 ntTSL 217.48■□□□□ 0.391e-7■■□□□ 11.4
PRPF8Q6P2Q9 GATAD2A-208ENST00000444839 565 ntTSL 514.42□□□□□ -0.13e-8■■□□□ 11.4
PRPF8Q6P2Q9 ST3GAL1-214ENST00000523854 626 ntTSL 312.42□□□□□ -0.428e-8■■□□□ 11.4
PRPF8Q6P2Q9 ELF4-203ENST00000434609 406 ntTSL 312.87□□□□□ -0.359e-7■■□□□ 11.4
PRPF8Q6P2Q9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.59e-7■■□□□ 11.4
PRPF8Q6P2Q9 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC7.36□□□□□ -1.239e-7■■□□□ 11.4
PRPF8Q6P2Q9 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.299e-7■■□□□ 11.4
PRPF8Q6P2Q9 TMEM259-212ENST00000607316 477 ntTSL 211.48□□□□□ -0.572e-13■■□□□ 11.4
PRPF8Q6P2Q9 SETD1A-203ENST00000640410 718 ntTSL 314.1□□□□□ -0.152e-6■■□□□ 11.4
PRPF8Q6P2Q9 MYO18A-217ENST00000533652 542 ntTSL 512.46□□□□□ -0.412e-6■■□□□ 11.4
PRPF8Q6P2Q9 ZFYVE27-209ENST00000473237 386 ntTSL 34.39□□□□□ -1.714e-16■■□□□ 11.4
PRPF8Q6P2Q9 DGKZ-224ENST00000534802 1999 ntTSL 214.97□□□□□ -0.011e-7■■□□□ 11.4
PRPF8Q6P2Q9 DGKZ-217ENST00000529660 493 ntTSL 512.31□□□□□ -0.441e-7■■□□□ 11.4
PRPF8Q6P2Q9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.08□□□□□ -0.163e-6■■□□□ 11.4
PRPF8Q6P2Q9 AMHR2-205ENST00000550839 887 ntTSL 313.95□□□□□ -0.183e-6■■□□□ 11.4
PRPF8Q6P2Q9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.53e-6■■□□□ 11.4
PRPF8Q6P2Q9 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.663e-6■■□□□ 11.4
PRPF8Q6P2Q9 AMHR2-203ENST00000548303 583 ntTSL 310.83□□□□□ -0.683e-6■■□□□ 11.4
PRPF8Q6P2Q9 AMHR2-206ENST00000552233 2162 ntTSL 1 (best)10.2□□□□□ -0.783e-6■■□□□ 11.4
PRPF8Q6P2Q9 AP1G2-222ENST00000556152 673 ntTSL 38.97□□□□□ -0.979e-9■■□□□ 11.4
PRPF8Q6P2Q9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.97□□□□□ -0.016e-25■■□□□ 11.4
PRPF8Q6P2Q9 DANCR-202ENST00000425653 823 ntTSL 1 (best)13.99□□□□□ -0.176e-25■■□□□ 11.4
PRPF8Q6P2Q9 AGRN-205ENST00000469403 899 ntTSL 321.9■■□□□ 1.19e-19■■□□□ 11.4
PRPF8Q6P2Q9 NUCB1-209ENST00000465524 839 ntTSL 513.75□□□□□ -0.213e-9■■□□□ 11.4
PRPF8Q6P2Q9 ALOX5-206ENST00000498461 604 ntTSL 221.05■□□□□ 0.965e-7■■□□□ 11.4
PRPF8Q6P2Q9 ALOX5-203ENST00000481117 514 ntTSL 218.15■□□□□ 0.55e-7■■□□□ 11.4
PRPF8Q6P2Q9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.45e-7■■□□□ 11.4
PRPF8Q6P2Q9 RNF166-207ENST00000565083 588 ntTSL 315□□□□□ -0.015e-7■■□□□ 11.4
PRPF8Q6P2Q9 TBC1D31-209ENST00000520368 653 ntTSL 414.4□□□□□ -0.115e-7■■□□□ 11.4
PRPF8Q6P2Q9 SERTAD3-203ENST00000596456 535 ntTSL 313.71□□□□□ -0.215e-7■■□□□ 11.4
PRPF8Q6P2Q9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.29□□□□□ -0.285e-7■■□□□ 11.4
PRPF8Q6P2Q9 CBFA2T3-207ENST00000564416 399 ntTSL 513.17□□□□□ -0.35e-7■■□□□ 11.4
PRPF8Q6P2Q9 ALOX5-205ENST00000493336 636 ntTSL 313□□□□□ -0.335e-7■■□□□ 11.4
PRPF8Q6P2Q9 GRB10-217ENST00000473696 1065 ntTSL 412.63□□□□□ -0.395e-7■■□□□ 11.4
PRPF8Q6P2Q9 SERTAD3-204ENST00000599706 747 ntTSL 212.06□□□□□ -0.485e-7■■□□□ 11.4
PRPF8Q6P2Q9 SMARCC2-212ENST00000552566 534 ntTSL 211.64□□□□□ -0.553e-12■■□□□ 11.4
PRPF8Q6P2Q9 ANKRD12-207ENST00000581635 631 ntTSL 49.59□□□□□ -0.875e-7■■□□□ 11.4
PRPF8Q6P2Q9 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC6.73□□□□□ -1.335e-7■■□□□ 11.4
PRPF8Q6P2Q9 TBC1D31-213ENST00000522276 879 ntTSL 33.69□□□□□ -1.825e-7■■□□□ 11.4
PRPF8Q6P2Q9 TBC1D31-205ENST00000518684 605 ntTSL 33.67□□□□□ -1.825e-7■■□□□ 11.4
PRPF8Q6P2Q9 TUBE1-203ENST00000441191 625 ntTSL 52.4□□□□□ -2.025e-7■■□□□ 11.4
PRPF8Q6P2Q9 TUBE1-209ENST00000604814 1784 ntTSL 51.99□□□□□ -2.095e-7■■□□□ 11.4
PRPF8Q6P2Q9 GTF2H1-216ENST00000607664 550 nt-0.29□□□□□ -2.465e-7■■□□□ 11.4
PRPF8Q6P2Q9 SEPT8-215ENST00000492490 581 ntTSL 413.81□□□□□ -0.22e-8■■□□□ 11.4
PRPF8Q6P2Q9 SELENOP-215ENST00000515626 566 ntTSL 49.18□□□□□ -0.942e-11■■□□□ 11.4
PRPF8Q6P2Q9 SELENOP-202ENST00000506078 799 ntTSL 28.46□□□□□ -1.062e-11■■□□□ 11.4
PRPF8Q6P2Q9 SELENOP-207ENST00000510650 580 ntTSL 31.92□□□□□ -2.12e-11■■□□□ 11.4
PRPF8Q6P2Q9 ATAD3B-202ENST00000378736 414 ntTSL 58.65□□□□□ -1.021e-9■■□□□ 11.4
PRPF8Q6P2Q9 HDLBP-236ENST00000477477 340 ntTSL 59.82□□□□□ -0.844e-17■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.63□□□□□ -0.075e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.31□□□□□ -0.125e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.21□□□□□ -0.135e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.1□□□□□ -0.475e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-209ENST00000535561 551 ntTSL 312.06□□□□□ -0.485e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-205ENST00000444946 917 ntTSL 2 BASIC11.33□□□□□ -0.65e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-204ENST00000401980 523 ntTSL 411.06□□□□□ -0.645e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-214ENST00000545162 571 ntTSL 310.17□□□□□ -0.785e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-210ENST00000537657 507 ntTSL 28.76□□□□□ -1.015e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-203ENST00000367055 990 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.015e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-216ENST00000546260 4302 ntTSL 58.04□□□□□ -1.125e-8■■□□□ 11.4
PRPF8Q6P2Q9 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.425e-8■■□□□ 11.4
PRPF8Q6P2Q9 STK25-215ENST00000439101 779 ntTSL 522.3■■□□□ 1.166e-12■■□□□ 11.4
PRPF8Q6P2Q9 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.51e-6■■□□□ 11.4
PRPF8Q6P2Q9 CD53-204ENST00000476408 756 ntTSL 54.91□□□□□ -1.621e-6■■□□□ 11.4
PRPF8Q6P2Q9 ACSF2-211ENST00000506582 594 ntTSL 515.19■□□□□ 0.021e-6■■□□□ 11.4
PRPF8Q6P2Q9 LRP1-208ENST00000555124 550 ntTSL 412.52□□□□□ -0.412e-6■■□□□ 11.4
PRPF8Q6P2Q9 ZNF692-228ENST00000533976 527 ntTSL 423.08■■□□□ 1.286e-14■■□□□ 11.4
PRPF8Q6P2Q9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.24■■□□□ 1.152e-9■■□□□ 11.4
PRPF8Q6P2Q9 SUGP2-205ENST00000594445 732 ntTSL 321.73■■□□□ 1.072e-10■■□□□ 11.4
PRPF8Q6P2Q9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.032e-9■■□□□ 11.4
PRPF8Q6P2Q9 SIRT3-212ENST00000530067 681 ntTSL 519.23■□□□□ 0.672e-7■■□□□ 11.4
PRPF8Q6P2Q9 SIRT3-203ENST00000525237 430 ntTSL 318.79■□□□□ 0.62e-7■■□□□ 11.4
PRPF8Q6P2Q9 ZNF354B-202ENST00000520377 763 ntTSL 1 (best)18.77■□□□□ 0.592e-7■■□□□ 11.4
PRPF8Q6P2Q9 SIRT3-206ENST00000526854 785 ntTSL 318.28■□□□□ 0.522e-7■■□□□ 11.4
PRPF8Q6P2Q9 AUH-205ENST00000478465 751 ntTSL 317.94■□□□□ 0.462e-9■■□□□ 11.4
PRPF8Q6P2Q9 TMEM44-207ENST00000430601 682 ntTSL 317.79■□□□□ 0.442e-7■■□□□ 11.4
PRPF8Q6P2Q9 SLC19A1-210ENST00000486303 708 ntTSL 217.7■□□□□ 0.422e-7■■□□□ 11.4
PRPF8Q6P2Q9 EHD1-204ENST00000421510 1015 ntTSL 317.49■□□□□ 0.392e-7■■□□□ 11.4
PRPF8Q6P2Q9 MRPL43-212ENST00000487059 810 ntTSL 217.47■□□□□ 0.394e-8■■□□□ 11.4
PRPF8Q6P2Q9 LDLRAD4-212ENST00000587905 743 ntTSL 517.17■□□□□ 0.342e-7■■□□□ 11.4
PRPF8Q6P2Q9 TSG101-203ENST00000535077 685 ntTSL 317.05■□□□□ 0.322e-9■■□□□ 11.4
PRPF8Q6P2Q9 TSG101-210ENST00000545247 783 ntTSL 316.61■□□□□ 0.252e-9■■□□□ 11.4
PRPF8Q6P2Q9 TSG101-202ENST00000438874 581 ntTSL 1 (best)16.25■□□□□ 0.192e-9■■□□□ 11.4
PRPF8Q6P2Q9 EHD1-205ENST00000433803 1191 ntTSL 516.14■□□□□ 0.182e-7■■□□□ 11.4
PRPF8Q6P2Q9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.93■□□□□ 0.142e-9■■□□□ 11.4
PRPF8Q6P2Q9 MRPL43-213ENST00000493646 897 ntTSL 1 (best)15.92■□□□□ 0.144e-8■■□□□ 11.4
PRPF8Q6P2Q9 SIRT3-208ENST00000528702 1251 ntTSL 515.87■□□□□ 0.132e-7■■□□□ 11.4
PRPF8Q6P2Q9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.79■□□□□ 0.122e-9■■□□□ 11.4
PRPF8Q6P2Q9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.74■□□□□ 0.114e-8■■□□□ 11.4
PRPF8Q6P2Q9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.092e-9■■□□□ 11.4
PRPF8Q6P2Q9 P3H1-203ENST00000372526 654 ntTSL 315.57■□□□□ 0.082e-9■■□□□ 11.4
PRPF8Q6P2Q9 AAED1-204ENST00000464512 463 ntTSL 215.31■□□□□ 0.042e-7■■□□□ 11.4
PRPF8Q6P2Q9 ABHD17A-203ENST00000588598 5425 ntTSL 215.27■□□□□ 0.042e-9■■□□□ 11.4
PRPF8Q6P2Q9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.26■□□□□ 0.034e-8■■□□□ 11.4
PRPF8Q6P2Q9 NR2C1-213ENST00000551386 631 ntTSL 415.11■□□□□ 0.012e-7■■□□□ 11.4
Retrieved 100 of 73,762 protein–RNA pairs in 1035.9 ms